Lacticaseibacillus casei 12A: LCA12A_2587
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Entry
LCA12A_2587 CDS
T03665
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcx03000
]
LCA12A_2587
Transcription factors [BR:
lcx03000
]
Prokaryotic type
Helix-turn-helix
Other families
LCA12A_2587
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
HTH_24
HTH_65
HTH_23
MarR_2
HTH_NPRL3
DUF7343
Motif
Other DBs
NCBI-ProteinID:
EKQ01876
LinkDB
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Position
374818..375648
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AA seq
276 aa
AA seq
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MDPELTDLFKQFHFSKYESQCYVTMLQLPASTGYEIAKRSGIPRSKIYEVLNRMTERGIV
LASKSDPTYYNVISADELVTTLGHQASAQLARIKTRLANVETKQDGELIYSIPNRKQTQD
KLSDLLAHCEKSLYLQIWKEDISSDILGELTRLSKILDHFVVILFSNRHDYHMPFTRVYP
HWFERDKLLDFGGRWVNAVIDGAEVLYGTFGDEGDDVIYTRNHSFVFIAQEYVIHDAYDL
RTLETLDAAAKKAFGPDLEGVRDIYMMDRKGKNAHD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggatcctgaactaacagacttgttcaagcagtttcatttttctaagtacgagagtcag
tgttacgtcacgatgcttcaattaccagcgagtaccgggtacgaaatcgcaaaacgatca
ggtattccgcggtcaaaaatctatgaagttctgaatcgtatgacggaacgtggcattgtt
ttggcaagcaagagtgatccaacgtattacaacgttatctctgctgatgaattagtgaca
acactcggacaccaagcttctgcccagttggcacgaataaaaacacgattagcgaatgtg
gagactaaacaagatggtgaactgatttattcaattcccaacagaaaacagacacaggac
aaactgtcagacttattagcgcattgcgagaagtcgctttacttacaaatctggaaagaa
gatatcagttcggacattttaggagaactaacacgactttctaagattcttgatcacttc
gtcgtcattctgtttagtaatcgtcatgactatcacatgccttttacacgagtatatccg
cactggtttgaacgtgataaactactggacttcggcggccgttgggttaatgccgtcatt
gatggtgctgaggttctttatggcacttttggggatgaaggtgatgatgtcatctatacg
agaaatcattcgtttgttttcattgcgcaagaatatgtgattcacgatgcgtatgatctg
agaacgctggaaactttagatgcagcagcaaagaaggcgtttggtccggatctcgaaggc
gtcagagatatttatatgatggatagaaaagggaagaatgctcatgattaa
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