Lacticaseibacillus casei 12A: LCA12A_2626
Help
Entry
LCA12A_2626 CDS
T03665
Name
(GenBank) trehalose operon transcriptional repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcx03000
]
LCA12A_2626
Transcription factors [BR:
lcx03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LCA12A_2626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_Crp_2
Rrf2
HTH_36
HTH_41
DUF6432
DUF5701
Motif
Other DBs
NCBI-ProteinID:
EKQ01219
LinkDB
All DBs
Position
570410..571126
Genome browser
AA seq
238 aa
AA seq
DB search
MRKYDVIYQDLKDKIEAEIYTTGSLLPSENTLQDMYQASRDTVRKALRLLKDDGFIQSQK
GRGSIVINRQEYVFPVSGVVSYAELAKQLHLQTRTVVLANHFAALPAKSFKDVDPDVEVK
QMRLLKRVRYLEKEPDIIDIDYLDPRVVPPIPESVARDSLYAYLEGQIGLEIAYATKEIT
VETATEEDRRYLNLPEGAMVVVVRSCSSLADTRKFQYTESRHRADRFKFHDFARRARP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtatgatgtgatctatcaggatttgaaagataagatcgaggccgaaatttat
acgactggttcattattgccgagcgagaatacgctgcaggatatgtatcaggcatcgcgc
gacacggtacgtaaagctttgcggctgctcaaagatgatggcttcattcaatcgcagaaa
ggcagaggatcaatcgtgatcaatcgccaagaatatgtcttcccggtgtcaggtgtcgtc
agttatgccgaattggctaagcagcttcacttgcagacaagaaccgtggtgttggccaat
cattttgccgcacttccggccaagtcctttaaagatgttgatccggatgttgaagtcaag
cagatgcgtttgctgaagcgagtgcgttacttggaaaaagagccggatatcattgatatc
gattatttggatccaagagtcgtgccgccgattccggagtcggtggcaagggattcgttg
tatgcgtatctcgaaggacaaattggcttggaaattgcttatgccacaaaagagatcacg
gttgaaacggcaactgaagaagatcgtcgttatctaaatcttcctgaaggtgccatggtt
gtagttgttcgcagttgcagtagtttggcagacactagaaaatttcaatacacagagtca
cggcaccgggcagatcgcttcaagttccacgacttcgcccggcgcgcacgaccatag
DBGET
integrated database retrieval system
