Loigolactobacillus coryniformis subsp. torquens: LC20004_01900
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Entry
LC20004_01900 CDS
T05341
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_01900
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC20004_01900
Archaeal homologous recombinant proteins
LC20004_01900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
ATO42749
UniProt:
A0A2D1KKV0
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All DBs
Position
412806..413924
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AA seq
372 aa
AA seq
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MRFLHTADWHIGKKLHGYELWTEQEDAFQQILTLAQQKKVDAVVLAGDIYDRALPSEQAV
ATVNQMLQQINLTAQLPLLAISGNHDSATRLETGSPWFTATNFYLNTKLEQAFTPIELAD
TQFFLLPYFEPFAARQYFGDDKLRTIAQAMPKIVAAMQEKFKADKKHVLVAHFFAAGSQQ
SDSETKVTVGGLDAVPTDALAAFDYVALGHLHNETALHAERIKYSGSPLKFSVSEAQQQK
GVWLIDTDPFQAEFLPLKPLRDVAEVTASFAQLTDPAYYGQLERDDYLAINLTDTKVIPN
VMQELRKIYPYILSLSRENGREVTATSTPQIRTLSPMALLADFFQETTTQSLTTKQEKLA
AAALKAAQKDGE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttacatactgctgattggcatattggcaaaaaattacatgggtatgagcta
tggactgaacaagaagatgcctttcaacagattctaaccttggcccagcaaaaaaaagtg
gatgcagttgtattggcgggtgatatttatgatcgtgccttgcccagtgaacaagctgtg
gcaactgtcaatcaaatgttacaacagatcaatttgacggcacaactgccattgctggcg
atttccggtaatcatgatagcgcgacacgtttggaaacggggagtccttggtttacggcc
accaatttctatttgaatactaagctcgaacaagcatttacaccaattgagctcgcggat
acacagttcttcctattgccttattttgagccctttgccgcacgccaatactttggtgac
gataaattgcggacgatcgcgcaggcgatgccaaaaatcgttgcggcgatgcaggaaaaa
tttaaagccgacaagaaacatgtcctagtggcccatttttttgcggcgggtagccaacaa
agtgattcggaaactaaagtaaccgttggtggactagacgcagtaccaacggatgcattg
gcagcttttgattatgtagcattaggccatttacacaatgagacggcgctgcatgctgag
cgcatcaaatatagtggttcaccattaaagttttccgtttcggaagcacaacagcagaaa
ggggtttggttgattgatacagatccatttcaggctgagtttctaccattaaagccgcta
cgggatgttgccgaagtgactgccagctttgcgcaactcacggatccagcctattatggc
caacttgagcgggatgattatttggcgatcaatttaacggatactaaagttattcccaat
gtgatgcaggaactgcgtaaaatttatccctatatactaagcttatcccgcgaaaatggt
cgcgaagttactgcaacctcaacgccacagattcgaaccttatcaccaatggctttgttg
gcggacttttttcaagaaacgacgacgcagtccttgacgactaagcaagaaaaattagca
gcggcagcacttaaagcagcacaaaaggacggtgagtag
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