Loigolactobacillus coryniformis subsp. torquens: LC20004_02875
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Entry
LC20004_02875 CDS
T05341
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03420
Nucleotide excision repair
lcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC20004_02875
03430 Mismatch repair
LC20004_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_02875
Enzymes [BR:
lcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC20004_02875
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC20004_02875
MMR (mismatch excision repair)
Other MMR factors
LC20004_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_30
DEAD
UvrD_C
MC3
Not3
NACHT
Arabinose_trans
SLFN-g3_helicase
WipA_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATO42922
UniProt:
A0A2D1KLI6
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All DBs
Position
621487..623787
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AA seq
766 aa
AA seq
DB search
MDAETKQQEQARVTDVIAKIEQRLQDKNAQLDQAHRETTSIERNYGDNTRVNITEADDRI
ETNAAVQQQKQLVARTVENESILKQQISQLKDLQQSPYFGRIDIDEAGDRDTLYIGTSSF
IDAKQNFLVYDWRAPISGIYYNGTLGKVSYETPTGPVQAELLKKRQFLIEHGKIENLFDT
NETVGDSMLQHVLGADSDEYMRNIVATIQQEQNDIIRDTKHDILIVQGVAGSGKTSAILQ
RIAFLLYHSRESLNSEQMILFSPNRLFSHYISEVLPSLGEKNMRQVTLAEFLEQRFSGLR
VETLFDRYEQDQSSFPRTAQKIRRYKESYTYIQAVEHYLRQAQPQQLAFTDVYFEGRAFF
TKAEIAAIYARLPVKMLAADKFLATKNTLIKRLKRRIHEEAKADWVAAEVDMLDEDRYRS
IVGEQRFDSGDDEFQFIAEKLVRDRLAIVYDALYNDYFIDMYEQYADFMRQATPNDVTAK
FWQTMIASYKQQLERHHLRLEDAAPLLYLRDRLTGSGQNHAMQHLFIDEMQDYTMAQLAY
IKHAFPKAKLTLLGDRAQDLFTAHYRQNDFIDELTTIFQTHSINLITLNKSYRSTFPITT
FAAALLPAGNEIQAFTRDGHKPLLVMTDSTADSLQQITKQCRRLLLQHETVAVLTKDRAT
STRLYARLKLDVETTLMTDADRALPKGVLILPIYLAKGLEFDAVVAYDVSAVHFNAEGDR
DILYTIASRAMHELVLISTGAPCQFIDAVPAEMLARVTVSPANELS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaaactaagcagcaggaacaagcgcgcgtaactgatgtgatcgctaaaatt
gagcaacgattgcaagataaaaacgcacaattggaccaggcacatcgtgagactacctcg
attgaacgaaattatggcgataacacgcgggtcaatattactgaagcggatgaccgaatc
gaaactaatgctgccgtgcagcagcaaaaacaattagttgcacggactgttgaaaatgag
tcgatcttaaaacagcagatcagtcaattaaaagatctacagcagtcaccttattttggc
agaatcgatattgatgaagcgggtgatcgcgatacattatatattgggacctcgtcattt
attgatgctaaacagaactttttagtttatgattggcgggcgccaatctcgggtatttac
tacaatggcacactgggtaaagtgagttatgaaacgccgactggcccggtacaagctgaa
ttactgaagaagcggcaatttttgatcgagcacggtaaaattgaaaatttatttgatacc
aacgaaacagttggcgatagtatgctgcaacatgtattaggtgctgatagtgatgaatat
atgcgtaatattgttgcgacgatccagcaggaacagaatgatattattcgtgatacgaaa
catgatattttgatcgtacagggggtagctggttcagggaaaacatcggctatactgcag
cggatcgcttttctactgtatcatagccgtgaatcgttaaattctgagcagatgatttta
ttttcaccgaatcgcttattcagtcattatatttcggaagtgcttcccagtttaggtgaa
aaaaatatgcgtcaggtcactttagctgaatttttggagcagcgcttttctggcctacgg
gtggagaccttgtttgatcgctatgaacaggatcaatctagctttcctagaacagcacag
aaaattcgacgctataaagaaagctatacgtacattcaggctgtggaacattatttacgc
caagcccaaccgcagcaattagcctttacggatgtatattttgaaggtcgtgctttcttc
actaaggcagaaattgcggcaatttatgcccggctaccagttaaaatgttggcggcggat
aaattcctcgcaactaaaaacacgttaattaagcggctgaagcggcgcattcatgaggaa
gctaaagctgattgggtggcagcagaagttgatatgctcgatgaagatcgttatcgaagt
attgtcggtgagcaacgctttgatagtggtgatgatgagtttcaatttattgccgaaaag
ctggtgcgtgaccgcttagccattgtttatgacgcattgtacaacgattattttattgat
atgtacgagcagtatgctgattttatgcgccaggccacaccgaacgatgtgaccgctaag
ttttggcagactatgattgcgagctacaagcaacaattagaacggcaccatttacgttta
gaggatgctgcgccattgctgtatttgcgcgatcgtctgaccggtagtgggcagaatcac
gcgatgcaacatctatttattgatgaaatgcaagattacacgatggcacaattagcttac
atcaagcacgcttttcctaaagctaaattaactttattaggcgatcgtgcgcaggattta
tttaccgcccactaccgacaaaatgattttattgatgaattgacgactattttccagacc
cacagcatcaatttgatcacgttgaataaaagttaccgctcaacctttccaatcacgact
tttgcggcagcgttattgccagctggaaatgagatccaggcctttactcgcgatggtcat
aagccactgttggttatgacggactcaacggctgatagtttgcagcagatcactaaacaa
tgtcggcgtttactcttacagcacgaaacagtcgcagttttgactaaggatcgtgcaaca
agtacgcgattgtatgcacggttaaagttggatgttgagacaacgctgatgacggacgct
gatcgcgctttgcccaagggcgttttgattttaccaatttatttagcgaagggcttagaa
tttgatgcagtcgttgcttatgatgtatctgctgtgcattttaatgcagagggtgatcgt
gatatcttatatacaatcgcttcacgggcgatgcatgaattagtgttgatcagtaccggt
gcgccatgtcaatttattgatgctgtaccagcagaaatgctagctcgggtcactgtatca
ccggcaaacgaattatcctga
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