Loigolactobacillus coryniformis subsp. torquens: LC20004_03495
Help
Entry
LC20004_03495 CDS
T05341
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcy03016
]
LC20004_03495
Enzymes [BR:
lcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LC20004_03495
Transfer RNA biogenesis [BR:
lcy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC20004_03495
Prokaryotic type
LC20004_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CUB_M02D8_5_2nd
Motif
Other DBs
NCBI-ProteinID:
ATO43024
UniProt:
A0A2D1KLM3
LinkDB
All DBs
Position
734581..735366
Genome browser
AA seq
261 aa
AA seq
DB search
MLRYKVTIAYDGTQFAGFQLQVKQRTVQGVMEKAVRTIAKSPTRIVVNGSGRTDAGVHAL
GQVVHFDFPFALPAAAMLKALNSLLPLDVVVKDCQVADSGFHARYDTTGKRYVYRVSRGY
YTDPFRRFYTGHWKYALDVDKIELALNDFIGTHDFSSFAASGGSIKNKVRTIFAATVTED
PASDELIFEFYGNGFLYNMVRIMVGVALEIGNGRRPVHDILRLYEVKDRTQARYTAPASG
LYLKKVYYGDGPADKGDLVTL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgttacgttataaagttacgatcgcctatgacggcactcaattcgcaggttttcagctt
caagtgaagcaacggactgttcagggcgtcatggagaaggctgtacgaaccattgctaaa
tcaccaacccgaatcgtggtcaacggttctggccgtactgatgcgggtgttcatgcatta
gggcaggtcgtgcattttgattttccatttgccttaccagccgctgcgatgttaaaagcc
ttaaatagtttgctaccattggatgtagtggtcaaggattgccaagttgcggactcaggc
ttccatgcgcgctatgacacaaccggtaaacggtatgtttatcgcgttagccgtggttat
tatacggatccttttcggcgcttttacactggtcattggaagtacgctttagatgtggat
aaaattgaactagcgctgaatgattttattggcacccatgattttagtagttttgctgca
tctggtggcagtattaaaaataaggtgcgtacgatttttgctgccactgtaactgaggat
ccagcgagtgatgaattaatttttgaattctatggcaatggcttcttatataatatggta
cgtattatggttggggttgctttagaaattggtaatggtcgtcggccagtgcacgatatt
ttacgtttatacgaagttaaagaccgtacacaagcacgttacacggcaccggctagtgga
ctttacttgaaaaaagtctattatggtgatggtccagctgataaaggtgatttggttacg
ctttaa
DBGET
integrated database retrieval system
