Loigolactobacillus coryniformis subsp. torquens: LC20004_04795
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Entry
LC20004_04795 CDS
T05341
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC20004_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_04795
Enzymes [BR:
lcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LC20004_04795
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LC20004_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3089
Motif
Other DBs
NCBI-ProteinID:
ATO43260
UniProt:
A0A2D1KM92
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All DBs
Position
complement(998184..998948)
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AA seq
254 aa
AA seq
DB search
MKFISWNVNGLRAVVKKNFMEFFEQQDADFFCIQETKLQAGQIELTLPGYYQYWNYAERK
GYSGTAIFTKHEPLNVTYGMGVAEHDQEGRLITLEYKDFYLLTCYTPNSQTKLKRLDYRM
SWEDAFRSYISTLNQKKPVIFCGDLNVAHEPIDLKNDKTNHHNAGFSDEERAKFSQLLSA
GFTDSFRYFYPDQVTYSWWSYRFNARQNNAGWRIDYFVTADQLQPQLADAAILTDVLGSD
HCPVMLTTKPELQA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttatttcgtggaacgtcaatggtttacgtgcagtcgttaaaaagaactttatg
gaattttttgaacaacaggatgccgactttttctgtattcaagaaactaagttacaagcc
ggtcaaattgaattgaccttgccgggctactaccaatattggaattatgccgaacgcaaa
ggctactccggcaccgccattttcaccaaacacgaaccactgaacgtcacctatggcatg
ggcgttgccgaacatgatcaagaaggccgcctgatcaccctagaatataaagatttttac
ttactcacctgctacacacctaattcacaaactaaattaaaacggctggattatcggatg
tcatgggaagacgcttttcgcagctacatcagcacactaaatcagaaaaagccagtgatc
ttctgcggtgatttaaacgttgcccatgaaccaattgatttgaaaaacgataaaaccaat
catcacaacgctggcttttccgatgaagagcgcgcaaagttcagtcagctgctttccgcc
ggttttaccgatagcttccgttatttctaccctgatcaagtgacttattcttggtggagc
tatcgctttaatgctcgccaaaacaatgctgggtggcgaatcgactatttcgttactgcc
gaccaactacaaccacaattagcggatgcagctatcttaactgatgttcttggttccgat
cactgccccgtcatgctaaccactaagccagagctacaggcatag
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