Loigolactobacillus coryniformis subsp. torquens: LC20004_06055
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Entry
LC20004_06055 CDS
T05341
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy00260
Glycine, serine and threonine metabolism
lcy00460
Cyanoamino acid metabolism
lcy00630
Glyoxylate and dicarboxylate metabolism
lcy00670
One carbon pool by folate
lcy00680
Methane metabolism
lcy01100
Metabolic pathways
lcy01110
Biosynthesis of secondary metabolites
lcy01120
Microbial metabolism in diverse environments
lcy01200
Carbon metabolism
lcy01230
Biosynthesis of amino acids
lcy01240
Biosynthesis of cofactors
lcy04981
Folate transport and metabolism
Module
lcy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LC20004_06055 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LC20004_06055 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC20004_06055 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LC20004_06055 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LC20004_06055 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LC20004_06055 (glyA)
Enzymes [BR:
lcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LC20004_06055 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ATO43492
UniProt:
A0A2D1KN91
LinkDB
All DBs
Position
1232670..1233920
Genome browser
AA seq
416 aa
AA seq
DB search
MNFYVDDQEVWQAIRQEEQRQEHNIELIASENIVSDAVRAAQGSVLTNKYAEGYPKHRFY
GGCEYIDVIEQLAIDRAKELFGAEYANVQPHSGSGANMAAYSALLEPGDRVIGMSLAEGG
HLTHGAPMSFSGQTYDFKSYGVDAKTGRIDFDAVRQLAHDFQPKLIVAGASAYSREIDFK
QFREIADEVDAYLMVDMAHIAGLVAAGLHQSPVPYADIVTTTTHKTLRGPRGGLILAKEQ
YAKAINSAVFPGIQGGPLEHVIAGKAIALKEALQPEFKAYAQQIIANAQAMAEVFAADER
IKIISGGTDNHLMLLDVTKFGLTGRDVQDLLDTVSITVNKNTIPNEQNGPFRTSGIRVGT
PAITTRGMKEAEAKQVAQLILRAIEQREDPNALAEVKRDVFALTEQFPINAKRFEF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttacgttgatgatcaggaagtttggcaggcaattcgacaagaggagcaacgg
caagaacataatattgagttaatcgcatcggaaaatattgtttctgatgcggtacgcgct
gctcagggtagtgtcttaactaataaatatgcagaaggctatccaaaacatcgtttttat
ggtggctgtgaatatattgatgtgatcgagcaattggcgattgatcgtgccaaagaatta
ttcggtgcagagtacgctaatgttcaaccgcactctggttctggggctaatatggcagcc
tattcggctttactcgaacccggtgatcgtgtgatcgggatgagtcttgctgaaggtgga
catttgacgcacggtgcaccaatgagttttagtggtcaaacttatgacttcaaaagttat
ggggtagatgctaaaacgggtcggattgattttgatgcagtgcgtcaattagcccatgat
tttcaacctaaattgattgtcgctggtgcttcggcttatagccgtgagatcgactttaag
caattccgtgaaattgctgatgaggttgatgcgtacttaatggtggacatggcccacatt
gctggtttagtagcagcgggcctacaccaaagccctgtaccatatgctgacattgttact
acgaccacccataaaactttacgtgggccacgtggcggccttatcttggcaaaagagcaa
tatgctaaggcaatcaactcagcagtctttcctggcatccaaggtggtccgttggagcat
gtgattgctggtaaggcaattgctttgaaagaagctttacagccagagtttaaggcctat
gcccagcagatcattgctaatgctcaagccatggccgaggtttttgctgcggatgagcgc
ataaaaattatttccggtggcacagataatcatttaatgttattggacgtcacaaaattt
ggtttaacaggtcgcgatgttcaggatctgctggatacagtcagcattactgtcaataaa
aatacgatccctaacgaacaaaatggcccattccggactagtgggattcgggtggggaca
ccggcgatcacaactcgtggtatgaaagaagccgaagctaagcaagtggcacaattaatt
ttacgggcaatcgagcaacgcgaagatccaaatgcattggccgaagttaagcgggatgta
ttcgctttaacggaacaatttccgatcaatgcaaaaagatttgaattttaa
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