Loigolactobacillus coryniformis subsp. torquens: LC20004_07475
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Entry
LC20004_07475 CDS
T05341
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC20004_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_07475
Enzymes [BR:
lcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LC20004_07475
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LC20004_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Glyoxalase_6
Motif
Other DBs
NCBI-ProteinID:
ATO43759
UniProt:
A0A2D1KNU6
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All DBs
Position
1529464..1530381
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AA seq
305 aa
AA seq
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MLLIGSHVAMRGKEMFLGSAKEAASYHATTFSIYTGAPQNTRRKPIAELNIPAGQAYMQQ
HELQSVVIHAPYIINLANTIKLDHFDFAVKFLQAEVQRAEALGAKQIVLHPGAHVGAGAA
AGIANIVKGLNEVLQPQQTVQIALETMAGKGTEVGRSFAELAEIIAGVHLNDKLSVCFDT
CHTNDAGYNVKEDLSGVLTEFDQIIGLERLQVVHLNDSKNPQGSHKDRHQNLGLGTIGFA
ALNEMAHLPELAKVPKIMETPWVKTDTGESFAPYGYEIAMLTAQKMNPTLMADIVAQQPF
SQNVG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctattaattggttctcacgttgccatgcggggtaaagaaatgtttttaggttcagct
aaagaagcggctagttatcacgccactacttttagcatttatactggagcaccgcaaaat
acgcgacgcaaaccgatcgcggagttgaatattccagctggtcaagcatatatgcagcaa
catgaactgcaaagtgttgtgatccatgcgccttacattattaatctagctaatacgatc
aagcttgatcattttgattttgcggtaaaatttttgcaggccgaagtgcaacgagctgaa
gccttaggggctaaacagatcgttttgcatccaggtgcgcacgttggggcgggagctgcg
gctggcattgcgaatattgttaagggtctgaatgaagttctacagccacaacaaacggtt
cagattgccctagagactatggccggtaaaggaacggaagttggtcgtagctttgctgaa
ctagctgagatcattgcgggtgtgcatttaaatgataaattaagtgtttgctttgatact
tgtcataccaacgatgctggctataacgttaaggaagatctttccggtgtgctgactgaa
tttgatcaaattattggtttagaacggctacaggtcgtgcatttaaatgattcaaaaaat
ccccaaggcagtcataaggaccggcaccaaaatcttggtttgggaacgataggctttgca
gcattaaatgaaatggcccatctccctgagttagcgaaagtaccgaagatcatggaaaca
ccgtgggtcaaaactgatacgggagaaagctttgcgccttatggttatgagatcgccatg
ttgactgcgcaaaaaatgaatcccactttgatggcggatattgtggcacaacaaccattc
agtcagaacgttggataa
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