Loigolactobacillus coryniformis subsp. torquens: LC20004_08705
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Entry
LC20004_08705 CDS
T05341
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcy03009
]
LC20004_08705
Enzymes [BR:
lcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LC20004_08705
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LC20004_08705
Ribosome biogenesis [BR:
lcy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LC20004_08705
23S rRNA modification factors
LC20004_08705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ATO43992
UniProt:
A0A2D1KPL0
LinkDB
All DBs
Position
complement(1789704..1790531)
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AA seq
275 aa
AA seq
DB search
MKKERIDVLLQQQGYFDSREQAKRAVMAGEVYDENNQRYDKPGSKIPNDTILHLKGKHMP
YVSRGGLKLAKALAVFKLDVTGKTVLDIGSSTGGFTDVMLQNGAARSYALDVGTNQLVWK
LREDPRVTVMEQTNFRYSKLADFTEGQPSFASIDVSFISLRLILPNLAIILQPGGDVVAL
IKPQFEAGPENVGKGGIVRDPKVHEMVLQTILDFAVAHHYDVLNLDFSPIKGGEGNIEFI
THLRLNLDADGQMAANVSIAATLKAAYQSLNAAKE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaacgaattgatgtcttattacaacaacaaggttattttgattcgcgggag
caagctaaacgtgcggtaatggccggtgaagtttatgacgaaaataaccagcgttatgat
aagccaggtagcaaaattcccaatgatactattttacatttaaaaggtaaacatatgcct
tacgtcagtcgtggtggcttgaagttagcgaaagcgttggcggtatttaagctggatgtc
actggtaaaacagtattagatatcggttcctcaactggtggttttactgatgttatgcta
caaaatggtgcggcacgtagctatgccttggatgttgggactaatcaattagtctggaaa
ttgcgcgaggacccgcgcgtcactgtaatggagcaaacgaattttcgttacagcaagttg
gctgattttacggaaggccaacctagttttgcctcaattgatgtttcttttatttcgctg
cggctgatcttgcctaacttggcgataattttacaacctggtggcgatgtggttgctttg
atcaagccccaatttgaggccggcccagaaaatgtgggcaaaggcggcatcgtacgtgat
cctaaagtacacgaaatggttttgcaaacaattttagactttgctgttgcccatcattat
gacgtattgaatctagatttttcaccgatcaaaggtggcgaaggtaatatcgagtttatc
actcatttacgtttgaatttagatgcagacgggcaaatggctgctaatgtatcgattgcc
gccacattaaaagcggcctatcaatcgctgaatgcggctaaagagtaa
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