Loigolactobacillus coryniformis subsp. torquens: LC20004_09085
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Entry
LC20004_09085 CDS
T05341
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03030
DNA replication
lcy03410
Base excision repair
lcy03420
Nucleotide excision repair
lcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC20004_09085
03410 Base excision repair
LC20004_09085
03420 Nucleotide excision repair
LC20004_09085
03440 Homologous recombination
LC20004_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcy03032
]
LC20004_09085
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_09085
Enzymes [BR:
lcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC20004_09085
DNA replication proteins [BR:
lcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LC20004_09085
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LC20004_09085
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC20004_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Kinase-PPPase
HAD_2
HHH_5
BCAS2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ATO44061
UniProt:
A0A2D1KPP1
LinkDB
All DBs
Position
complement(1861494..1864160)
Genome browser
AA seq
888 aa
AA seq
DB search
MADDKHLLLIDGNSVAFRAFFALHSQINTFVNHNGLHTNAIYAFNTMLDIVLKSFAPSHV
LVAFDAGKTTFRTTKFDDYKGQRDKTPSELSEQLPHLRDLLTAYGIRSYELANYEADDII
GTLAQEAAAQGFKVDVVTGDRDLTQLATESVTVNVTVKGVNQLEAYTPAHVAEKYELTPR
QIIDMKGLAGDTSDNYPGVTKVGEKTAIKLLKQFDSVEGIYENLDQLKASKMKEHLVADR
AQAFLSKDLATIRQDAPLTIGLADLVYQGRDVAALREFYQEMDFNSFLSKLADPETEQAR
AAIEFQELTAEAVPAVLASFTGPVTFYLEMLDTNYHTAPFAGFVIGQKGQWYVSREVELL
KLPAFTKFFADPQQAKLVFDAKRTYVGLNRLGITLAGISFDLLLVSYLLNPNDSGNDLGK
IAQLHQYRDVATDEEVYGKGVKRAIPDDSAVFFQHLAQKAQAIEQLQAKLDQQLVENEQD
GLFKEMELPLAIVLAQMEIAGIRVDPDRLNQLRKNFAQRIDELTKKIYAEAEEEFNINSS
KQLGEILFEKMNLPVIKKTKTGYSTAVGVLEQLKAIAPIASDVLDYRGLTKLQSTYIDGL
LKVIHPDDGKIHTTYLQTLTATGRLSSIDPNLQNIPVRDEDGRQIRQAFVPRKAGWQIFA
ADYSQIELRVLAHISHDQNLQAAFSEGADIHASTAMRIFGLESAAEVTPNMRRQAKAVNF
GIVYGISDYGLSQNLGITRKQAKTYIDSYFHEYPNVKQYMEDIVAAAKKYGYVETLFHRR
RYLPDIHSKNFNLRSFAERTAMNTPIQGSAADIIKVAMLNMQKALTEQQLQATMLLQVHD
ELIFEAPEAEIATLEKLVPQVMDAAVKLEVPMKVGYGSGPTWYDVKKG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgataaacatttattattaattgacggtaatagcgtcgcttttcgggcgttt
tttgccttacattcacagatcaacacgttcgttaatcacaacgggctgcacacgaatgcc
atctatgccttcaacacgatgttagatattgtgttaaaaagctttgcccccagccatgtg
ctggtagctttcgatgccggtaaaacgacttttcggacgactaaatttgatgattacaag
gggcaacgggataaaacacctagtgagctttcggaacagttaccgcatttgcgcgattta
ttgacggcttacggcattcgttcttacgaattggctaactatgaggccgacgatattatc
gggacgttagcgcaagaggcagcagcgcagggttttaaagtcgatgtggtcactggtgat
cgcgatttgacgcaactggcaaccgaaagcgtcaccgtcaacgtgacggtcaaaggggtg
aaccagttagaagcctacacgccggcgcacgttgctgaaaaatacgaactaacgccgcgg
cagatcattgacatgaaaggcttggctggtgatacttctgataattatcctggggtcacc
aaagttggtgaaaaaacagcgatcaagttattgaaacaatttgatagcgtcgaaggcatc
tacgaaaatctggatcagctgaaagctagcaaaatgaaggaacatttagtcgctgatcgt
gcgcaggcctttttaagtaaggatttagcgacgattcgtcaagatgcaccactgacgatc
ggtttggctgatctagtttatcaagggcgtgatgtcgctgctttgcgtgaattttatcag
gaaatggatttcaactcatttcttagtaaattggcggatccagaaacggaacaggcccgg
gcagccatcgaatttcaagaattgacggcagaagcggtgccagcagttctggctagtttc
actggtccggtgactttttatttagaaatgctggatacgaattaccatacggcaccgttt
gctggctttgtgatcggccaaaagggtcagtggtatgtgagccgcgaggttgaattattg
aagttaccagcttttactaagttttttgccgacccccagcaagctaagttggttttcgat
gccaagcgcacctatgttggtctgaatcggctaggcatcactttggcggggatcagcttt
gatctattactggtttcttatttgctcaaccccaacgatagcggcaatgacttaggcaag
atcgcccagttacaccaatatcgcgatgtggccactgatgaagaagtctatggtaaaggc
gttaaacgcgcaattcccgatgattcggcagtctttttccagcatttagcccaaaaggca
caagcaattgaacaattacaggctaagctagaccaacaattggttgaaaatgaacaagat
ggtttgttcaaggaaatggaactgccattggccattgttttagcacaaatggagatcgct
ggtattcgggttgatcctgaccgcttaaatcagttacgtaaaaactttgcccaacgcatt
gatgagctaactaaaaaaatctacgccgaagcggaagaagaatttaacatcaattcgtct
aagcaactaggcgaaattttatttgagaaaatgaatctgccggtgatcaagaaaacgaaa
accggttattcaacggcagttggcgtgttggaacaattaaaagcgatcgcaccgattgcc
agtgatgtgcttgattatcgtggcttgaccaagctgcaatcaacctacattgatggctta
ttgaaggtgatccatccagatgatggtaagatccacaccacttatttacagaccttgacg
gctacaggtcgtttatcgtcaattgatccgaatttacaaaatatcccagttcgtgatgaa
gatggccgccaaattcgtcaagcctttgtgccgcggaaagccggttggcaaatctttgcc
gctgattattcacaaatcgaattgcgggttttagcccacatttcccatgatcagaattta
caggcggcctttagtgaaggggcggatattcacgctagcacggcgatgcggatctttggc
ctagaaagtgcggcggaagtaacgcctaatatgcgccggcaagctaaagcggtcaatttt
gggatcgtctatggcatcagtgattacggcttgtcgcaaaacttaggtatcacccgtaag
caagctaaaacgtatattgatagttatttccacgaatatcccaacgttaagcaatacatg
gaagatattgtggcggcggccaaaaaatatggttacgtcgaaacgttatttcatcggcgc
cgttatttaccggatatccactcgaagaatttcaatttacggtcatttgctgaacggacg
gcgatgaatacgccgatccaaggtagcgcggctgatatcatcaaagtagcaatgttaaat
atgcaaaaggcgttaacggaacagcagttacaagcaaccatgttattacaggtccacgat
gaattgatttttgaggcaccagaagcggagatcgccactttagaaaagttggtgccacaa
gtcatggatgccgcagttaagttggaagtgccaatgaaggtcggctacggcagcggccca
acttggtacgatgttaaaaaaggttag
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