Loigolactobacillus coryniformis subsp. torquens: LC20004_09385
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Entry
LC20004_09385 CDS
T05341
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC20004_09385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcy02000
]
LC20004_09385
01504 Antimicrobial resistance genes [BR:
lcy01504
]
LC20004_09385
Transporters [BR:
lcy02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LC20004_09385
Antimicrobial resistance genes [BR:
lcy01504
]
Gene variants
Macrolide resistance genes
Transporters
LC20004_09385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_22
AAA_16
AAA_23
nSTAND3
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_5
NACHT
DUF5906
AAA
NB-ARC
TsaE
AAA_33
AAA_18
AAA_14
AAA_7
SRPRB
AAA_28
ABC_tran_Xtn
G-alpha
AAA_27
FtsK_SpoIIIE
AAA_25
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ATO44118
UniProt:
A0A2D1KPP7
LinkDB
All DBs
Position
complement(1929414..1930916)
Genome browser
AA seq
500 aa
AA seq
DB search
MPKIEIKNLTFGYDGQAKPLFEQANFLLDSQWKLGLVGRNGRGKTTLLRLLQGQLPYQGT
IQQHQQFSYFPQPISDKSQLTFYVLAEISGAEQWQIEREMSQLGLAADLLWRPFNTLSGG
EQTKVLLAVLFIEDGAFPLIDEPTNHLDLQGRQQVAVYLQQKRQGFIVVSHDRHFLDEVT
DHTLAIEKNQISSYQGNFATYEAQKQLSDNFEQAQNSKLKKDIGRLKQTAAEKAKWSQAR
EGDKYGDPRKKGSGAVYDTGFIGARAARTMKRSKHLAQRMENEISEKERLLKNTEQVDPL
SMAFSPSHHQRLLTVDQLQLGYEQPLFQPLSFDLQQGQRLALVGPNGAGKSTIVRQLLGH
FRGSVSGQVQQPAQLQISYVRQDYEDNQGTLMDFAEAQGLDYTVFLNNLHKLGMPRDVFN
TRIELMSMGQRKKVELAKSLSLPAELYIWDEPLNYLDVFNQEQLERLISAVQPTMLLIEH
DQTFIERVATKVVALEKADQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaattgaaattaaaaatttaacctttggctatgatgggcaagcaaaaccgttg
tttgaacaagccaattttttactggatagtcaatggaaattagggctagtcgggcgtaat
gggcgtggcaaaaccacgttattacgcttattacaaggacaactgccttatcaaggaacg
attcagcagcaccagcaatttagctatttcccgcagccgatcagtgataaaagtcagttg
acgttttatgtgttggcagaaatcagtggcgctgaacagtggcagatcgagcgagaaatg
agccagcttgggttagcagcggatctattatggcggccgtttaatacgctatctggtggc
gagcaaactaaagttttgctggcagtattatttatcgaggatggggcttttccgttgatc
gatgagccgaccaatcatttggatctgcaagggcgtcagcaggtcgccgtttatttgcaa
caaaagcgacagggctttattgtggtcagtcatgatcggcattttctcgatgaagtgact
gatcatactttggcgatcgagaaaaatcagatcagtagctatcagggtaactttgctact
tatgaagcacaaaagcagttaagtgataactttgaacaggcgcaaaatagtaagctgaaa
aaagatatcggtcggctaaaacaaacggcggcggaaaaagcgaagtggtcgcaagcccgt
gaaggtgataaatatggcgatccgcgtaaaaaaggcagtggtgcggtttacgatactggc
tttattggggcgcgggcagcgcggacaatgaaacggtcaaagcatttagcccagcgaatg
gaaaatgagatcagtgaaaaagaacgcttgttaaaaaatactgagcaggtcgatccgttg
tccatggcgtttagcccgagccatcaccaacgattattgacggtggatcaactacaatta
ggttatgaacagccattatttcaaccactatcgtttgacttgcagcaaggtcagcgttta
gcattggtagggcctaatggggcaggtaaatcaacgatcgtccgtcaattacttggccat
tttaggggaagcgtaagtggacaagtacagcagccggcacagctacagatcagttatgtg
cgccaagattacgaagataatcagggcacattgatggattttgctgaagcgcaggggcta
gattacaccgtgtttttgaataatttgcataagctggggatgccgcgggatgtttttaat
acgcggatcgaattgatgagcatgggtcagcgcaaaaaagttgagttagctaaatcgctg
tcgttaccggcggagttgtatatttgggatgaaccgttgaactatttagatgtgttcaac
caagaacaattggaacgattaatttcggcggtccaaccgacgatgctgctgatcgagcat
gatcaaacatttattgagcgagtagcgaccaaagtagtggcactagaaaaggcagaccaa
taa
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