KEGG   Loigolactobacillus coryniformis subsp. torquens: LC20004_09500
Entry
LC20004_09500     CDS       T05341                                 
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
lcy  Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:lcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcy03009]
    LC20004_09500
Enzymes [BR:lcy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     LC20004_09500
Ribosome biogenesis [BR:lcy03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LC20004_09500
SSDB
Motif
Pfam: PseudoU_synth_2 S4 OAF_N
Other DBs
NCBI-ProteinID: ATO44138
UniProt: A0A2D1KPR5
LinkDB
Position
complement(1946662..1947387)
AA seq 241 aa
MRLDKFLVHAGVGSRKEVQRLIRGKQVQLNAVVVTSSKANVVPERDQVDVAGEMVHYQQF
YYYMLNKPAGVLSATTDPQQRTVIDLLAATDQRADLFPVGRLDKDTTGLLFLTNDGQLAH
QLLSPRRQVVKIYRALIAGIVTAADQQRFAAGITTKAGNEFAPADLRILAVDPVQQQSQI
EVTLHEGKFHEVKRLFQAVSKEVLTLQRIEMGGLQLDTTLAAGVYRALTDAEITLLQAAV
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtttagataaatttttagtgcatgctggcgttggtagccggaaagaagtgcagcgg
ctgattcgcggtaagcaggttcagctcaatgcggtagtggttaccagtagcaaggcaaat
gtggtgccagaacgtgatcaagttgacgtagctggtgaaatggttcattatcagcaattt
tattattatatgctgaataagccagcgggtgttttgtcggcaacgactgatccacagcag
cggacggtgatcgatttattagcggctaccgaccagcgggctgatttgtttccagttggt
cgtttggataaagacaccacgggcttattgtttttgactaatgatgggcagttggcgcat
caattgttaagcccgcggcggcaagtggttaaaatctatcgggcattgatcgcgggcatc
gttaccgcggctgatcagcaacgttttgcggctggtattacgacgaaggcaggcaatgaa
tttgcgcccgccgatttgcggatcttagcggttgatccagtgcagcagcaaagtcagatc
gaagtgaccttacatgaaggcaaatttcatgaagttaaacgtctcttccaagcagtcagt
aaagaagtgctgacgttgcagcgaatagagatgggcggcttgcagttagatacgacgtta
gccgctggtgtctatcgcgccttaacggatgccgaaattacattgttacaagcagcagtt
tcctaa

DBGET integrated database retrieval system