Loigolactobacillus coryniformis subsp. torquens: LC20004_10110
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Entry
LC20004_10110 CDS
T05341
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC20004_10110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_10110
Enzymes [BR:
lcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC20004_10110
DNA repair and recombination proteins [BR:
lcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC20004_10110
RecFOR pathway proteins
LC20004_10110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
AAA_16
AAA_22
NB-ARC
nSTAND3
DUF815
RNA_helicase
AAA_3
Sigma54_activat
AAA_24
NTPase_1
Bac_DnaA
TsaE
NPHP3_N
AAA_25
ResIII
AAA_33
NACHT
Sigma54_activ_2
Rad17
ABC_tran
IstB_IS21
Parvo_NS1
ATPase_2
AAA_17
bpMoxR
AAA_18
AAA_11
AAA_19
AAA_28
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
ATO44231
UniProt:
A0A2D1KQ69
LinkDB
All DBs
Position
complement(2053750..2054769)
Genome browser
AA seq
339 aa
AA seq
DB search
MADDRVISPETADAGEAGMEKSLRPQYLRQYIGQDKVKSELQVYITAAQKREESLDHVLL
YGPPGLGKTTLAMVIANELQVNIRTTSGPAIERPGDLVAILNELQPGDVLFIDEIHRLPK
IVEEMLYSAMEDFFVDIVIGQGPTAHPVHFPLPPFTLIGATTRAGLLSAPLRDRFGIVAH
MAYYNEQDLTDIVERSAAIFDTTIVTEGAHEIARRSRGTPRVANRLLKRIRDFAQVADQS
AIDLPIVEKALQLLQVDGRGLDYVDQKLLRAMIDYYNGGPVGLSTIAANVGEETDTIEEM
YEPYLLQIGFLKRTPRGRVVTPQAYAHLGIPFEQKSKTN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatcgtgtaatttcacctgaaacggcagacgcaggtgaagccggtatggag
aaatcgttgcgaccacagtatttgcgccaatatattggtcaagataaggtcaaaagcgaa
ttgcaagtttatatcactgctgcgcaaaagcgtgaagagtcgctggatcatgtgttactt
tatgggccaccaggtctaggtaaaacgacgctagcaatggtgatcgctaatgaattgcag
gtcaatattcgaacgaccagtggaccagcaattgaacgtcctggtgatttagtggcaatt
ttaaacgaattgcagccgggcgatgtattatttatcgatgaaattcatcgtttaccgaaa
attgttgaggaaatgctttactcagcaatggaggactttttcgttgatattgtgattggc
caaggaccgacggcacatccagtgcattttccgttgccaccatttactttaattggtgcg
acgacacgtgctggtttattgtcagcaccattacgtgatcgtttcggtatcgtggcgcat
atggcctattacaatgagcaagatctaaccgatattgttgaacgttcagcagcaattttt
gatacaaccatcgtcactgaaggggcgcatgaaattgcccggcgttcgcggggaacgccc
cgggtggctaatcgtttactgaagcgaattcgtgattttgctcaagtagccgaccaatca
gcaattgatttaccgatcgttgaaaaggcattacagttactacaagttgatggtcgcggc
ttagattatgttgatcaaaaattattacgagcaatgatcgactattataatggcggtcca
gttggtttaagtacgattgccgccaatgtcggtgaagagaccgatacaatcgaagaaatg
tacgaaccttacttattacaaattggcttccttaaacgaacaccgcgtggtcgtgtcgta
acgccccaagcatacgctcatttaggaataccgtttgaacaaaaatcaaagaccaattag
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