Loigolactobacillus coryniformis subsp. torquens: LC20004_10840
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Entry
LC20004_10840 CDS
T05341
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcy03019
]
LC20004_10840
Messenger RNA biogenesis [BR:
lcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LC20004_10840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
CoaE
nSTAND3
AAA_16
AAA_28
DUF5447
PPL4
Motif
Other DBs
NCBI-ProteinID:
ATO44358
UniProt:
A0A2D1KQC9
LinkDB
All DBs
Position
complement(2217048..2217932)
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AA seq
294 aa
AA seq
DB search
MVDTLNLVVITGMSGAGKTVAMQSFEDLGYFCVDNMPPSLLPKFWELVKESGKVTKIALV
IDLRSRAFYDEIDEMLANLDNTNFVTTKILFLDASNEELVSRYKETRRAHPLAMEGRLLD
GIVKERNLLAEIKNRSQLIIDTTELTPRQLREEIFNNFKSAETTTFHIEVMSFGFKYGVP
IDADIVMDVRFLPNPYYVPEFKKLTGLNQAVYDYVMQQPATEDFYERFSSMLHFIMPGYE
KEGKTSLTIAIGCTGGQHRSVALAERLGKDLGQHYPVDTTHRDMNKRKETVNRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtagatactttaaatttagttgtgatcactggcatgagtggcgctggtaaaacagtt
gccatgcaaagcttcgaagatctcggctatttctgtgttgataacatgccacctagcttg
ttaccgaagttttgggaattagtcaaagaatcaggtaaagttaccaaaatcgcactagtt
atcgatttacgttcacgtgcgttttacgatgaaatagatgaaatgctggctaatttggat
aacactaattttgttacaaccaagatcctctttttagatgcttctaatgaagagttggtt
tcgcgttacaaagaaacacggcgcgctcatccattagcaatggaaggccgtttattagat
ggtatcgtcaaggaacggaatttgttggctgagatcaaaaatcggtcacaattgatcatt
gatacgactgaattgacgccacggcaactgcgtgaggagatttttaataactttaaatcc
gcagaaaccacgacgttccatattgaagtgatgtcgtttggctttaaatatggtgtaccg
atcgatgcggatattgtgatggatgttcgtttcttgcctaatccatattatgtgcctgaa
tttaaaaagttaactggcttgaatcaggctgtttatgattacgttatgcaacaaccggct
acggaagacttctatgaacggtttagcagtatgctacatttcatcatgcctggctatgaa
aaagaaggtaaaacgagtttaacgatcgcaatcggctgtactggtgggcaacatcgttca
gttgcgttggcggaacgattaggtaaggatctggggcaacactatccggttgacacgacc
catcgcgatatgaataagcggaaggagactgtgaatcgctcatga
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