Loigolactobacillus coryniformis subsp. torquens: LC20004_13375
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Entry
LC20004_13375 CDS
T05341
Name
(GenBank) helicase
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Type_ISP_C
Mrr_cat_2
ResIII
Helicase_C
N6_Mtase
DEAD
Mrr_cat
SLFN-g3_helicase
DEP
Motif
Other DBs
NCBI-ProteinID:
ATO44825
UniProt:
A0A2D1KRQ2
LinkDB
All DBs
Position
complement(2792882..2797639)
Genome browser
AA seq
1585 aa
AA seq
DB search
MRPDQTRPENDFDSLIAQIDESANGVQRDRGTMFEEVVKSYLLNEPAYKNLYDDVWLLSE
VPAEYHIPKKDLGVDLVARHRDSGELTAVQAKYYRGKVGKDTINSYVAELNKNYYVDGLL
VATTDDWNKNAEAALDDGSKDINRIGLSDLKHSSFDWSQFSFGNAEKAITASHKQPREYQ
KEAITKTVAYFANHERGKLIMAPGTGKTFTSLKIAEAMAAHEQKQDYFVLYLVPSIQLLS
QTLFSWNSDVTTATNLVSFAVTSDRNASKKRTYNNNDDSDINIQDIGFPASTNADKLMAN
FKALTPTSGQRITVIFSTYQSIDVIHQAQALGYPEFDLIIADEAHRTTGSHAANEEAGIF
TKVHNNKIVQARHRLYQTATPKIYSQDTKKKGQEENIVIASMDDVDMYGDEIFRLGFGDA
VAKGILTDYKVEVLAVDEAVIQRNLQSSLATENGLNIDDIGKIIGVWNAMMKRESFSNKT
AGNPMQRAIAFASVIDNQRGHGAGKVGSKQIAQEFSHVVNEYLGTDNSNNFHVDVKHVDG
SMNALQKKDAIDWLAADLPDDEARVLSNVKFLTEGIDVPNLDAIIFFAPKQSQIDIVQAV
GRIMRKYKDKEYGYIILPVVVPSGQDPDTVLDDNKTYQAVWQVLNALRSIDERFEASVNK
LDLNKKKPRNLNVIGVGDAPDDGFDRSDKHTGDSHGAEQTELELNWHEIQDAIYGRIVKK
VGDRRYLEDWTADVQALAERHIRWIQTLIADKQSPFAKSFKRYVKSLQHNINSDIDDQQA
IEMLAQHVITKPIFEALFDQYSFVNDNPVSCAMEDMIQQMIKAGFDQEQAALEPFYESVR
IRATGIDNAAAKQQFIVTLYDKFFSTGFSATTEKLGIVFTPVEIVDFIVKSVDEVLKEHF
GRGLDAENVHVLDPFTGTGTFIARTLEYLNQEMQTGKITLADITRKYTQELHANEIVLLS
YYIAAINIESVFDEINGAEDYIPFDGIVLTDTFESTENNAVLDEDMFGGNNKRLKKQQEV
PITAIISNPPYSMGQKNRNDNNKNTYYARLERRIQDTYGKESKAGAGNSIHDSYVKAFRW
ASDRLGEQGIIGFVTNGSFLDSKSTDGLRKSFYDEFNYLYIYNLRGNQRTQGETSRKEGG
KIFGSGSRAPIAISILVKDGSDEHHLYYKDIGDYLSRQQKFDAISNAESVSGIDWTELTP
DDNNDWLNQRDAGYQTFTPLPTDKQNDGVLAKNVMGVKTNRDAWVYGFNKDDTARKTGLL
IDHYNTERKRIKKTGSDLNRDPQYIKWTQKLERLIHSDKELKFNQEKIRLSLYRPFTKKW
LYYNPDLVEMTSLYYKQFGVSNEVIFTTGRGASKDFSALATDLIPNMHLEDTGQGFMRYN
NEEKNSVENILAPDRDNVSVAFAAKLGLTTDETYAYVYGLLNSPEYQRRYANDLKKDLAR
IPIVKNVQRYVVIGQQLLDLHINYEDVEPYADCKITMHADKPSYRVQKMRFKSRADHSVI
KFNSDITIADIPERAYDYVVNGRSAIEWIMDQYQIKTDKASQIIDDPNEYSDDPQYIFKL
LLRVVTVSLKTLDLIGTLPQFEVVE
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagaccagaccagaccagaaaatgattttgacagtttaattgcccaaattgat
gaaagtgccaacggcgtacaacgcgaccgtggcaccatgtttgaagaagttgttaagtct
tatttactgaatgaaccggcctacaagaacttatatgatgatgtatggctattaagtgag
gttcccgccgaataccatattcctaaaaaagaccttggcgttgaccttgtggcgcggcat
cgcgattcgggtgaattaaccgccgtacaggctaagtattatcgcggcaaagttggtaag
gataccatcaatagttacgttgccgaactcaataagaattactatgtagacggtctatta
gtcgccaccacggacgactggaacaagaacgccgaagcggcactagatgatggttctaag
gatattaaccgcatcgggctgtctgacctcaagcactctagcttcgactggtcgcaattc
agttttggcaatgcggaaaaggcaatcaccgccagtcacaagcaaccgcgggaataccaa
aaagaggcaatcacgaaaacggtggcctattttgctaatcacgaacgcggaaaattgatt
atggctcctgggactgggaagacgtttactagtctcaagattgcggaagctatggctgca
catgaacagaaacaagactattttgtgctgtatctggtacccagtattcagttgttgtct
cagaccttgtttagctggaacagtgatgtaacaacagccacgaatctggtttcgttcgcc
gttacttctgaccgaaacgcgtctaagaaacgaacatataacaataacgatgacagcgac
atcaatattcaagatattggcttcccggcctcaaccaatgctgataagttgatggcgaac
ttcaaggcactcacaccaaccagtggtcaacggattaccgtgattttcagcacttaccaa
tctattgacgtcatccatcaagcccaagcacttggttaccccgaatttgatttaattatc
gccgacgaagcccaccgcacgactggctcacacgcggctaatgaagaagctggtattttc
accaaggtacacaataacaagattgtacaggcacgtcaccggctctatcaaaccgcgacc
ccgaagatttactcccaagatacgaagaaaaagggtcaagaagaaaatatcgtgattgcg
tccatggatgacgtggacatgtacggcgatgaaatcttccgacttggctttggcgacgct
gtggctaagggaattctgactgattacaaggtagaagtgttagccgtggatgaagccgtg
attcagcggaacttacaaagcagtctcgccaccgaaaacggcttaaacattgatgatatt
ggtaaaatcattggcgtctggaacgcgatgatgaaacgcgaaagcttctcgaataagacc
gcgggcaatccaatgcaacgagccattgcgtttgcctccgtaattgataatcagcgcggt
cacggtgcaggtaaagtcggttcaaaacagattgcacaagaatttagccatgttgtcaat
gagtatctgggcacggataattcaaataactttcacgttgatgtcaagcacgttgacggg
agtatgaacgccttacaaaagaaagatgccattgattggttagcagccgatttgcctgat
gatgaagcacgggtgctgtctaacgttaagttcttaacggagggcattgacgtacctaat
ctggacgccattattttctttgccccgaaacagtcccagattgacattgtgcaagcggtt
ggccggattatgcgtaagtacaaggacaaggaatacggctatatcattttgccagtggtc
gttccatccggccaagaccccgacacggtattggatgacaacaaaacctaccaagcagtt
tggcaagtattgaacgccctccgctccattgatgaacgctttgaagcttcggttaacaaa
ctcgacttaaacaagaagaagccgcgcaacctgaacgtgattggtgttggcgatgcgcct
gatgatggctttgaccgttctgacaaacacaccggcgacagtcacggcgctgaacaaacc
gaattggaactaaactggcatgaaattcaagatgccatctatggtcgaattgttaaaaaa
gtgggtgaccgccgttacctagaagactggacggctgatgtgcaagcactggcagaacgg
catattcggtggattcaaaccctaattgcagataagcagtcgccgttcgccaagtcattt
aagcgctatgtgaagagtctgcaacataatatcaatagtgatattgatgaccagcaagca
attgagatgttggcccagcacgtgattaccaagccaatctttgaagcgttgttcgaccag
tatagtttcgtcaacgacaatccggtttcctgcgcgatggaagacatgattcagcagatg
atcaaagcgggctttgaccaagaacaagcggccttggagcccttctacgaatcggtccgg
atacgagcgactgggatagataatgcggcggcgaaacaacaattcatcgtcaccttgtat
gataagttctttagtaccggatttagtgccactaccgaaaagctgggaattgtctttacg
ccggtggaaattgtggactttattgtgaagtctgtagatgaagtactgaaagaacatttt
ggccgtggccttgatgcggagaacgtgcatgttttagacccgttcaccggcacagggacg
tttattgcgcgtactcttgaatacctgaatcaggaaatgcaaaccggtaagattacgctg
gccgacattacgcgtaaatacacgcaggaactgcacgccaatgaaattgtgttgttaagc
tattacatcgcagcaattaacattgaatccgtctttgatgaaatcaatggggcagaagac
tatattccgtttgatggtattgttctaactgatacgtttgaatcaacggaaaataacgcc
gtgctggatgaagatatgtttggtggtaataacaagcgactcaagaagcaacaagaagta
ccaattaccgcgattatcagtaacccaccgtattctatgggacaaaagaatcgaaatgac
aataacaaaaacacctattatgcacgcttagaaaggcgaatacaggatacttacggcaag
gaaagcaaggcaggcgccggtaatagtattcatgacagttatgtaaaagcgttccgttgg
gcaagtgaccggttgggagaacaaggtattataggctttgtgactaacggaagcttttta
gattcgaagtctaccgacggattgcggaagtcgttctatgatgagttcaactacctatat
atttataacctgcgaggcaatcaacggacacaaggcgaaacgtcacgtaaggaaggtgga
aaaattttcggttcaggtagccgggcaccgattgccatttcaatcttggtcaaagatggc
tccgatgaacaccacctgtattacaaagacattggtgattacctttctcgccaacagaag
tttgatgcgatttcaaatgccgaatcagtgagcggtattgattggactgaattgacgcct
gatgacaataatgactggttaaatcagcgtgatgctggatatcaaacatttactcctctc
cctactgataagcaaaatgatggagtactggctaaaaacgtaatgggtgtgaagaccaat
cgtgatgcatgggtgtatggatttaataaggacgataccgcacgtaagacaggtttgcta
atcgaccactataatactgaacgtaaacggattaagaagacaggttctgatttaaatcgt
gacccacagtacattaaatggacacagaaactggaacggctgattcatagcgacaaggag
ttgaaatttaaccaagaaaaaatacggctaagtttatacaggccattcacaaagaaatgg
ctgtactataaccccgacttagtagaaatgaccagtctatactacaaacaattcggcgtc
agcaatgaagttatcttcaccactggtcgcggggcatcgaaggacttttcagcgttggca
actgacttgattccaaacatgcacttggaagataccggtcaaggcttcatgcgttacaat
aatgaagaaaaaaattcagtcgaaaatatccttgcaccagaccgagataatgtttccgtt
gcatttgcggctaagttaggcctgaccactgatgaaacttacgcgtacgtttatggctta
ctgaactcacccgagtatcaacgacggtatgctaacgatctcaagaaggacttagcacgc
attcccatcgtcaagaatgtgcagcgatacgtagtgattggtcaacagttgcttgaccta
cacattaattatgaggacgtcgaaccatatgctgattgtaagataaccatgcatgcagat
aagccaagctatcgagttcagaaaatgcggtttaagtcacgcgctgatcacagtgtgatt
aagttcaattcagatattacgattgcggatattcctgaacgggcttatgactatgttgtt
aatgggcgttcggcaattgaatggattatggatcagtatcaaatcaaaactgataaggcc
tcacaaattatcgatgacccaaacgaatacagtgacgacccacagtatattttcaagttg
ctattacgagtagtgacggtttcccttaaaacactagacttgattggcacgcttccccag
tttgaagtggttgaataa
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integrated database retrieval system
