Loigolactobacillus coryniformis subsp. torquens: LC20004_14425
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Entry
LC20004_14425 CDS
T05341
Name
(GenBank) ISL3 family transposase
KO
K07485
transposase
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC20004_14425
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_ISL3
Zn_ribbon_ISL3
ZSWIM1-3_RNaseH-like
DDE_Tnp_IS240
CGI-121
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
ATO45122
UniProt:
A0A2D1KSS6
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Position
pLDW-4:complement(64747..66018)
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AA seq
423 aa
AA seq
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MCHDTTKLLLGIADENLKITDGETGEDGVIRLTGHLDYTPKACPKCGIINDQKIINYGWR
NTTIRFSKVLSNTVILALKRRYFHCKECHGNFLAQTVAVPKHCTISNTSRKECLEKLGEP
VSLKHIANEVSASDSFVGRQLMRAERDFQTNWHYLPEIILMDEVKSTKSATGAMSFEFMN
GETHELIDLLPYRTINKLEKYFYRFDQAARENVKIIVTDMNYTYPKLVQTVFPNAMVVMD
KFHIINALNRAFNKTRIKVMKKFTPSSREFHALKRYWKLLLVPTEQLNFEQFKKWTNFPY
WMAATDVVHQLLSLDSELEQTYQVLNSVRSAVQHQDWHNYNAAFWNNKTYSEEMKNTIKT
LESHHDEIRNTFTTHYSNGPLEGSNNKIKAIKRASFGYRSFWRFRTRVLYVFKIKTKRAL
ITK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatgatactacaaaattattattaggaatagctgacgagaacctaaaaattact
gacggtgaaactggagaagacggggttattcgcttaactggccacttggattacacgccg
aaggcttgtcccaagtgcgggattatcaatgatcaaaagattattaactacggttggcgc
aataccactatcagattctcgaaggttctgagcaacaccgtcatcttagccttaaagcgc
cgctatttccactgtaaagaatgtcacggcaactttcttgcacaaacagtggcagttccg
aaacactgtacaatttcaaacaccagccgcaaagaatgcctagagaagctcggtgaaccg
gtctctttgaagcacattgccaatgaagtatcggcatcagattcatttgtgggccgccag
ttaatgcgcgctgaacgagactttcaaaccaattggcactatttaccagagatcatctta
atggatgaggtgaagagtaccaagagcgctactggtgccatgagctttgagttcatgaat
ggcgaaacccatgaattaatcgacttactcccttatcgaaccatcaataaactagagaag
tatttttaccgcttcgatcaagctgcccgagaaaacgtcaaaattattgtgactgatatg
aattatacctaccccaagcttgtgcagaccgtgttccccaatgccatggtggtcatggac
aagtttcatattatcaacgccctaaatcgggcgtttaacaaaaccagaatcaaggtgatg
aagaagtttaccccgtcttctcgcgaatttcacgcccttaagcgctactggaagctgttg
ttagtaccaactgaacagcttaactttgaacaattcaaaaagtggactaattttccttac
tggatggctgccaccgatgttgtccatcagctgttatcgttggattcagaactagaacaa
acttatcaagtcttaaacagcgtccggtcagctgtccaacatcaagattggcataactac
aatgcggcattttggaataacaaaacgtattctgaagaaatgaagaacacgattaaaaca
cttgaaagccatcatgatgagattcgtaacacctttaccacacactattcaaatggtcct
ttggaaggttctaataataaaatcaaggcgatcaaacgagccagttttggctatcgcagc
ttctggaggtttagaactcgagtactatacgttttcaaaatcaaaacaaaaagagcccta
atcacgaagtga
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