KEGG   Loigolactobacillus coryniformis subsp. torquens: LC20004_14665
Entry
LC20004_14665     CDS       T05341                                 
Name
(GenBank) restriction endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lcy  Loigolactobacillus coryniformis subsp. torquens
Brite
KEGG Orthology (KO) [BR:lcy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcy02048]
    LC20004_14665
Enzymes [BR:lcy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LC20004_14665
Prokaryotic defense system [BR:lcy02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LC20004_14665
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD
Other DBs
NCBI-ProteinID: ATO45169
UniProt: A0A2D1KSU3
LinkDB
Position
pLDW-5:33503..36670
AA seq 1055 aa
MLELSFEKEVVKTLTTGSNQWVERKDLYGATPDQLWANFRDKLNNNNYAKLQGHPLTDTE
FNQVKRAIEVRTPYEAAKLLAAENGIGKVEVERDDAKLGTVTLELFWKADVAGGKSSYEV
VRQAVRPRLAGTQDVDPDRRFDVTLLINGLPLIQLELKKATVELNQAFNQIEKYAQEGKY
TGIYSLLQMFVIMTPDSTAYFANAEPDHFNKAFLFNWRTRDNHPVENGLAFTRQVLNIPM
AHKMVSEYTVIDQERQSLILLRPYQIYAIEAVMHRIHDHQDGFVWHTTGSGKTLTSYKTA
KLAAQDPGVDKVIFLVDRRDLDEQTTSNFSAYAANDDIAINEAQNTGDLMRKLQQNDGKV
LVTSIQKLHRAVKKTQAQLATGKQSRFSKTLKQRVIFFVDEAHRSQFGKMQKEIRDAFVN
SNWYGYTGTPIFNENKKQLKGDLAVTTEELFGKVCHVYNLRDALEDQAVLPFNVEHVTTI
GKDTLITRALEKENQRVKARRDKQGRLLSTADEAKIQAKIQAMSVKDLEETYLTPADFET
DEHINQVVQYILQKGPRKTSLGHGNYNAILTTSSIEMAQRYYQAFKAAKRATHNQLDPEW
PRIAITYSLSENEDQSAQKHDQMATILKDYNQQYHTNFDLADLNLYNEDVAKRAARREAV
FAHLQPDQEINLVIVVRRLLTGFDAPRLNTLFVDRTLAYQELIQAYSRTNRLQNRELKQE
GQIVTFRVPAIMEANEREAYKLYSGEGSFNVIIRPTYQQAVLKFQKAVVDLKTIAPTPTA
ADDLKGTTAKVHFVKAFRQVNQQLNSLSMYNDFTWENSEKAFGIAQPEVESYTGKYLRIK
AAVTKQKPGKVPEELAALDFSLAVGSVVLVDYDYLTQLIQDWIDEQQRYSTPDQAQAHMT
DYLQNSAKVQASLNKLAETQPQQAQLIREAMPYIEQQMQQSQQQSTPNQAPVALNARELV
ADYAQRQLVKKTSVFAHTWGLDQTALLRVAREHTVGTDKWHHEQELTQSANLAAALQAQT
AAGPKIPAILPLYRIKSQAAWRQFIEHDLAIYLQK
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgttggaactgtcatttgaaaaagaagttgttaaaaccttaacgaccggaagtaatcaa
tgggtggaacgaaaagacctgtatggtgcgacgccggatcaattatgggctaattttcgc
gataaattaaataacaataactatgctaaattgcagggacaccctttaactgataccgaa
tttaatcaggttaaacgggcgattgaggtccggacaccttacgaagcggctaaattacta
gccgccgaaaatggcattggcaaagtggaagttgaacgtgatgatgctaagctgggcacg
gtgacactcgagttattttggaaagcggacgtcgctggcggtaaatctagttatgaagtg
gtacggcaagcagtgcgaccacggttagctggtactcaagatgtcgatcctgatcgccgt
tttgacgtaaccctattgattaatgggttacccttaattcaattggaactaaaaaaagcc
acggtcgaacttaaccaggcttttaatcaaattgaaaaatacgcgcaggaaggtaaatat
acgggaatttactcgctgttgcaaatgtttgtgattatgacgccggatagtacggcgtat
tttgcgaatgccgaaccggatcatttcaataaagcttttttgtttaattggcggacgcgg
gataatcaccccgtggaaaacggcttagcgttcacgcgccaagttcttaatattcccatg
gcccacaaaatggtcagtgaatatacggtcatcgaccaagagcggcaaagcctaattctc
ttacggccttaccagatttatgcgattgaagccgtgatgcaccggattcatgaccatcag
gatggtttcgtttggcataccacgggttctggtaagacactcacctcatataaaaccgct
aaattagcggcgcaagatcctggtgtcgataaggtcatctttttagttgaccggcgggat
ttagacgaacagacaactagcaactttagtgcctatgctgccaatgacgatattgccatt
aacgaagcccaaaataccggtgatttaatgcgtaagttgcaacaaaatgacggtaaggtc
ttggtcacctcgattcaaaaacttcatcgggcggtcaaaaaaacgcaagcccagttagca
accggtaagcaatcccgctttagtaagactttaaagcaacgggtgatcttctttgttgac
gaagcccaccggtcgcagtttggtaagatgcaaaaggaaattcgggacgcgtttgtcaat
agtaattggtatggttacaccggcacccccatctttaatgaaaataagaaacagctcaag
ggtgatctagcggtcacgactgaggagctatttggtaaagtctgtcacgtttataacttg
cgagatgccttagaggaccaagccgtgttaccgtttaacgtcgaacatgtaacaacaatt
ggcaaagatacgttaataacccgggccctcgagaaagaaaaccagcgcgtcaaagcacgt
cgcgataagcaaggccgcctgctgagtacagctgatgaagcaaaaattcaagccaagatt
caagcgatgtcagtcaaggacttggaagaaacgtatttaactccggctgactttgagacc
gatgaacatattaaccaagttgttcaatatattttacaaaaaggcccgcgtaaaacgagt
ttgggtcatggcaactataatgctattttgaccaccagttccattgaaatggcgcaacgc
tattatcaagcctttaaggccgctaaaagggccactcacaatcagctagatcctgagtgg
ccccgaattgcgattacttattcattaagtgaaaacgaagatcagagtgcgcaaaaacat
gaccaaatggccaccattttaaaagattataatcagcagtatcacactaattttgattta
gccgatttgaatctctataacgaagatgtcgcaaaacgggctgcccggcgtgaggcggtc
tttgctcatttgcaacccgatcaggaaattaatttagtgattgtggtgcgacggttatta
acaggttttgatgcccctcggctaaacacgctctttgttgaccgcaccttagcttatcaa
gaacttattcaagcctactcacgcaccaaccggctccaaaaccgggaattaaaacaagaa
ggccaaattgtgacctttcgggtgccggcaatcatggaagcgaatgaacgtgaagcttac
aagttatatagtggcgaaggctcttttaatgtcatcattcggcctacttatcagcaggcc
gtcttaaaatttcaaaaggccgtggtcgatttaaaaaccattgccccgacgccgacggcg
gccgatgacctgaaaggaaccactgccaaggtacattttgtgaaagcctttcgccaagtg
aatcagcaattgaattccttatcgatgtacaacgatttcacttgggaaaacagtgaaaag
gcctttggtatcgctcagcccgaagtagaatcctatacgggtaaatatctgcggattaaa
gcggcggttactaaacaaaagcctgggaaagtccccgaagaattagctgccttagacttt
tccctagccgttggttcagtcgtcttggtggattatgattatttgacgcaattaattcaa
gattggattgatgaacagcaacggtactcgacgcctgatcaagcccaagcgcatatgacc
gattacctgcaaaacagtgccaaagtacaggctagtttgaataaattagcggaaacgcaa
ccgcaacaggcccagttaattcgcgaagccatgccttatattgagcaacaaatgcaacag
tcgcagcaacagagtaccccaaatcaagcgccagtagcgttgaatgctcgggagttggtg
gctgattatgcccagagacaattggtcaaaaaaacgtcggtattcgcccacacgtggggc
ttagatcaaacagccctattgcgggtggcgcgtgaacacaccgtgggtaccgataaatgg
catcatgaacaagaattaacgcagtcagcgaatttagcagcggccttacaagctcaaact
gccgctgggccgaagattccagctattttgccactataccggattaagtcccaggccgct
tggcggcagtttattgaacacgatttagcaatttatctacaaaaataa

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