Lacticaseibacillus paracasei Zhang: LCAZH_0713
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Entry
LCAZH_0713 CDS
T01280
Name
(GenBank) holliday junction resolvasome, helicase subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Pathway
lcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCAZH_0713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcz03400
]
LCAZH_0713
Enzymes [BR:
lcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCAZH_0713
DNA repair and recombination proteins [BR:
lcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCAZH_0713
RecFOR pathway proteins
LCAZH_0713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_14
AAA_16
AAA_22
DUF815
AAA_3
NB-ARC
AAA_24
AAA_25
RNA_helicase
ResIII
TsaE
NTPase_1
Bac_DnaA
Rad17
AAA_18
IstB_IS21
Sigma54_activ_2
NPHP3_N
AAA_17
ATPase_2
AAA_33
NACHT
Torsin
bpMoxR
AAA_11
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADK17998
UniProt:
A0A1S2AJF5
LinkDB
All DBs
Position
716186..717202
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AA seq
338 aa
AA seq
DB search
MADADKDRLVSGDVDDSNEAQIEKSLRPRMLAQYIGQDRVKHQLEVYITAAKQREESLDH
VLLYGPPGLGKTTLALVIANELGVNIRTTSGPAIEKPGDLVALLNELHPGDVLFIDEIHR
LPKIVEEMLYSAMEDFYIDIVVGQGPTAHPVHFPLPPFTLIGATTRAGMLSAPLRDRFGI
SEHMAYYSADDLSEIVKRSATIFDMAIDAEGAHEIARRSRGTPRVANRLLKRIRDFAEVA
GQSPVDIQMVDHALDQLQVDQQGLDQIDRKLLMFMIRDYEGGPVGLSTIAANIGEEMATI
EEMYEPYLLQIGYLKRTPRGRMVTPAGFAHMGLSAEQH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgcagacaaggatcgcttggtttctggcgacgttgacgattcgaatgaagca
cagatcgaaaaaagtttacgtccccggatgctcgcgcagtatattggtcaggatcgcgtc
aaacatcagttggaagtctatatcacggctgccaaacagcgcgaagagtcattggatcat
gttctgctctatggaccgcctggtttgggaaaaacgacgttggctttggtgattgccaat
gaactgggcgtcaatattcgcacgacatcagggcctgctatcgaaaaaccgggtgattta
gtggcactgctgaatgaattgcatcccggtgatgtcttgttcattgatgaaattcaccgt
ctaccaaaaattgtcgaagaaatgctttattcagcgatggaagatttttatattgatatt
gtggttggtcaagggccaaccgcccaccctgtgcatttcccgcttcctcccttcacctta
attggggcgacaacgcgcgctggcatgctttccgctccgttacgtgatcgatttggcatc
agtgaacatatggcgtattattctgctgatgacctcagtgagatcgtcaaacgatcagca
acaattttcgatatggcgattgatgctgaaggtgctcatgaaattgcccgacggtcgcgg
ggaacaccgcgggttgctaatcggctgctcaaacgtatccgtgattttgccgaagttgcg
gggcagagtccagttgatatacaaatggttgaccatgcgcttgaccagctgcaagtcgat
cagcaaggcttagaccaaattgatcgcaaactgttgatgttcatgattcgtgattacgaa
ggtggccccgttggactctcaacgattgccgctaacatcggcgaggaaatggcaacgatt
gaggaaatgtatgagccttatctgttacagatcgggtatttgaaacgaacgccgcgtggc
cgcatggtgacgccagccggatttgcacatatggggctgtcggctgagcaacattag
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