Lacticaseibacillus paracasei Zhang: LCAZH_1032
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Entry
LCAZH_1032 CDS
T01280
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Pathway
lcz03420
Nucleotide excision repair
lcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCAZH_1032
03430 Mismatch repair
LCAZH_1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcz03400
]
LCAZH_1032
Enzymes [BR:
lcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCAZH_1032
DNA repair and recombination proteins [BR:
lcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCAZH_1032
MMR (mismatch excision repair)
Other MMR factors
LCAZH_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADK18275
UniProt:
A0AAP4JK29
LinkDB
All DBs
Position
1004547..1006802
Genome browser
AA seq
751 aa
AA seq
DB search
MVMDAALKGMNDKQSEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKHVNPWNILAI
TFTNKAAREMRERVGKLVDAEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISSAKNELVEPQTYANEQANSPFTKVVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDKETLAFYQRKFRYIHVDEYQDTNEAQYQLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANDVI
QNNQNRQAKTLWTENREGDKITYYRAQSETDEAIFVIRRIEAEIADNHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPEDDMSFNRIVNEPKR
GIGNTSVEKLEAFANEHDWSLLEAAANAELSPIAGKARGQLAKFGKMIQELGTRRKDLNV
TEMMQAILEDSGYLSTLRAAHNLEADTRIENLEELLSVTQGFDSRYQPENEDSDIFVDFL
AELALLSDQDDVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRASMDESELEEE
RRLAYVGITRAKQKLYLSNAYGRMLYGQRQNNPASRFIEEINPDLLEVIGTTQPKSDIPF
INRTDRAFSSPYSRHAAQKTATPVTVQAAPTTGAGKTSWEAGDKVKHRKWGTGTVVKVTG
TGDDQELDIAFKDNGIKRLLAAFAPIVKVAS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaatctgaggcggtgttggcg
actgaagggccagtgctgattatggctggtgccggttcaggcaagacacgggtattgact
catcggattgcttatttagttgaagaaaagcacgtcaatccatggaacatccttgccatc
acgtttacaaataaggccgcccgtgagatgcgcgagcgggtcggcaagttggttgatgct
gagattgcgcgcgatatttgggtctcaacgttccatgcgctctgtgtccgaattttacga
cgcgacattgacaaactgggctataaccgtgcctttacgattgctgatcctgctgagcaa
ctgacgctagtgaagcatattttggctgatttcaatcttgatccaaagcgctacgatcct
aaatccattttaggtgctatttcgagcgctaaaaatgaactcgtggagccacaaacttat
gccaatgaacaggctaacagtcctttcaccaaagttgtggcgcaggtttatgcggaatat
caaaagcgtctgcgcagtgatcaggcattggactttgatgatctcatcatgcagaccatc
gtgctttttgaaaaagacaaagaaacactggcattctaccagcgtaagttccgctacatt
catgttgacgaatatcaggacactaacgaagcgcaataccagctcgtgcatatgttggca
gaaggctaccataatttatgtgtggttggtgatgccgaccagagcatttatggctggcgt
ggtgccaatatgcagaatattttggatttcaaaaaagactatccaaaggcgcaagtcatt
ttgcttgagcagaattatcggtcaactaaaactattttgagtgcggccaatgatgtgatt
cagaataatcagaatcgccaagccaaaacgttatggacggaaaatcgcgaaggcgacaag
attacctattaccgcgctcaaagcgaaactgatgaagctatttttgtcattcgccgaatt
gaagcagagatcgctgataatcatcgcaaatatggtgattttgcgattctgtaccgaacc
aatgcgcagtcgcgggcgattgaagaagcgtttgtgaagtccaacattccatataaaatg
gttggcgggcataagttctatgatcgcaaggaaattcgcgatgcgctagcgtatttccgg
ttagtggtcaatccggaagacgatatgagttttaatcgaattgtcaatgaaccaaaacgc
ggtattggcaacacaagcgttgagaagttagaggcctttgccaatgagcatgactggtcc
ttgctggaagcagcggcgaatgctgaactcagtccgattgctggtaaagctcgcggacag
ttagctaagttcggtaaaatgatccaggagctgggtacacggcgaaaagatctaaacgtg
accgagatgatgcaggcaattcttgaggatagtggctatttatcaacactgcgagcggcc
cacaatctggaagccgatacccgcatcgaaaacttagaagaattgctttcggtgacccaa
ggattcgattcccggtatcagccggaaaatgaagacagcgacattttcgttgattttctg
gctgaattggcgctgttatcggatcaggatgacgttgaagaagatgcacaagaagttacc
ttgatgaccttgcacgctgctaaaggactggaatttccggttgtctttttagtggggatg
gaagaaggactctttccattgagtcgggcttccatggatgaaagcgagctcgaagaggaa
cggcgcttagcttatgtcggcattacccgcgccaaacagaagctgtatctgtccaatgcc
tatggccggatgctgtatggtcaacggcaaaacaatcctgctagccgtttcattgaagaa
attaatcctgacttgttggaagtcattggcactacccagccaaaaagtgacattccattt
attaatcgtactgaccgcgcattcagctcgccgtatagccggcacgctgctcaaaaaaca
gcaacacccgttactgtgcaagccgcgccaacaacaggtgcaggcaaaaccagttgggaa
gctggcgacaaggtgaagcatcgcaagtgggggactggtaccgtggtgaaagtcacgggt
accggcgatgatcaagaactcgatattgcttttaaagacaacggcatcaaacgactgcta
gctgcctttgctccgattgtcaaagtggcatcataa
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