Lacticaseibacillus paracasei Zhang: LCAZH_1595
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Entry
LCAZH_1595 CDS
T01280
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LCAZH_1595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcz03019
]
LCAZH_1595
03009 Ribosome biogenesis [BR:
lcz03009
]
LCAZH_1595
03036 Chromosome and associated proteins [BR:
lcz03036
]
LCAZH_1595
Enzymes [BR:
lcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LCAZH_1595
Messenger RNA biogenesis [BR:
lcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCAZH_1595
Ribosome biogenesis [BR:
lcz03009
]
Eukaryotic type
90S particles
RNase
LCAZH_1595
Prokaryotic type
rRNA processing factors
LCAZH_1595
Chromosome and associated proteins [BR:
lcz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LCAZH_1595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Dicer_dsRBD
DND1_DSRM
DUF6614
Motif
Other DBs
NCBI-ProteinID:
ADK18826
UniProt:
S4ZMP9
LinkDB
All DBs
Position
complement(1561891..1562586)
Genome browser
AA seq
231 aa
AA seq
DB search
MVASEFVSELRQRYGIEFHDLSLLDEAFTHSSYVNEHKELGLKDNERLEFLGDAVLELTV
SDYLYRKFPDKPEGDLTRIRAAAVQTAAFSAFSKEAHFDRYIKLGKGEEKAGARKRLTLL
EDLFEAFNGALYLDQGRDANIRFAEQIIFPKIDAGEFSADQDHKTALQEVLQQNGDVAIV
YHLLDEQGPAHERQFHVDVEVDGRVLGTGFGKNKKAAEQAAAKAALASLKR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggttgcctcagagtttgtgagtgaattgcgtcaacgttatgggatcgagtttcatgat
ctcagtcttttggatgaggcgtttacgcattcctcatatgtgaatgaacataaagaatta
ggtttaaaagacaatgaacgattggaatttttaggcgatgctgtcttggaattgacagtt
tcagattatttgtatcgcaagtttcccgacaaacccgaaggcgatctcacccgaattcgg
gcagcggctgttcagacagcggccttctcggctttttcaaaagaagcgcatttcgaccgg
tatattaaacttggtaaaggtgaggaaaaggctggggcgcggaagcgcttaacgctgcta
gaagatttatttgaggccttcaatggcgccttataccttgatcaaggccgcgatgccaac
attcggtttgctgagcagattattttcccgaaaattgatgcgggagagttttcagccgat
caagaccacaaaacggctttacaggaagttttgcagcaaaatggtgatgtggcgattgtc
tatcacttattagatgagcagggaccagcccatgagcggcagttccacgttgatgtcgaa
gtcgatggccgggttttgggtaccggttttggcaagaataagaaagcggctgagcaagct
gctgcaaaagctgcattagccagcttgaaacggtaa
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