Lacticaseibacillus paracasei Zhang: LCAZH_1713
Help
Entry
LCAZH_1713 CDS
T01280
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcz03019
]
LCAZH_1713
Messenger RNA biogenesis [BR:
lcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCAZH_1713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADK18940
UniProt:
K6QPS3
LinkDB
All DBs
Position
complement(1673224..1674201)
Genome browser
AA seq
325 aa
AA seq
DB search
MTTLVKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDASDND
IAQFKAGEVVQLSGKRELYQGNPQIKIFSLRLATQEEGNDPKAFVERAPEAPSDMEEELN
SYIFEITNANWNRIVRKLINDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKSVVQQ
YSSLNKSLLYAGAILHDLGKTIELSGPISTDYTVEGNLIGHIVLIDEQIVLAAQQLKIDI
NAEDMLLLRHVVLAHHGLLEYGSPVRPELLEAQVLHDLDELDASINMMTTAYQHVDPGTF
TERLFGMDNRRFYRPKNGQTFPDPH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccttggtaaaacggcttttcgattatcataatgaagaagatgttcggcttccg
gtgctgattaaatcagctgaagtgcgtgtcgcaaagaatggcaaaaaatttattgcgatg
atttttcaagacaattcaggacatatttcaggtaagttctgggatgctagcgacaatgac
attgctcagtttaaggctggcgaagtcgtccaattgtcgggtaagcgtgaattatatcaa
ggcaatccgcaaattaagattttttcattgcggttggcaacccaagaggaaggcaatgat
cctaaagcctttgttgagcgggcgccagaagcacccagtgatatggaagaggaactgaac
agttacatcttcgaaatcaccaatgctaactggaatcgaattgtccgtaaactgatcaat
gatcacaagaaggcatttttcagttatccggcggccaagtcaaatcaccatgcttttgct
ggtggtctcgcttttcatacgctaagcatcttgcgacttgctaaaagtgtcgttcaacag
tattcgagcttgaacaaaagcttgctatatgcaggcgcaattttacatgatctcggtaag
accattgagttaagcgggccaatctcaactgattacacggttgaaggcaacttgattggt
cacatcgttctcattgacgaacagattgtcttagcagcacaacaacttaaaattgatatc
aacgctgaagatatgctcttactacgtcatgtcgtgcttgcacatcacggattgcttgaa
tacggctcgccggtgcggccagagcttcttgaagcgcaagtattgcatgatttagacgaa
ttggacgcatcaatcaatatgatgacaaccgcctaccaacatgttgatcctggtaccttc
acagaacgacttttcggtatggacaatcgtcgcttctatcgacctaaaaatggtcaaact
tttccggatccgcactag
DBGET
integrated database retrieval system
