Lacticaseibacillus paracasei Zhang: LCAZH_1919
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Entry
LCAZH_1919 CDS
T01280
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Pathway
lcz03420
Nucleotide excision repair
lcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCAZH_1919
03430 Mismatch repair
LCAZH_1919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcz03400
]
LCAZH_1919
Enzymes [BR:
lcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCAZH_1919
DNA repair and recombination proteins [BR:
lcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCAZH_1919
MMR (mismatch excision repair)
Other MMR factors
LCAZH_1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
DEAD
SLFN-g3_helicase
AAA_30
AAA_14
AAA_16
NACHT
FcoT
Motif
Other DBs
NCBI-ProteinID:
ADK19132
UniProt:
K6RYC8
LinkDB
All DBs
Position
complement(1869904..1872195)
Genome browser
AA seq
763 aa
AA seq
DB search
MAENEQAKEQTHLTGIMKELSGAESRLSKEMAKTKSEEKNISDNFFNDFSLNFTDYAETI
ETAASIQQQQRVLDERTNAWKQSAQQLATVKRLMGNPYFARIDFQEGREKPETIYIGLGS
FTNEAGKFLIYDWRAPISSIYYDGGLGKVTYQTPDGPQQVTVSLKRQFVIKNGKIQTMFD
TTETIGDQMLLEVLGEKSDTQMKTIVTTIQREQNQIIRDTKADLLFVQGAAGSGKTSAVL
QRVAYLLYRYRGNLSSSQVIMFSPNQLFSDYISNVLPELGEQNMVQFTYYQYVTRRLPHI
DVQNLFSQFEQQLTPVQKKIARVKGSLDFFETAKKYATSLEKSGLRFRDIRFRGEVFFSR
RRIHEIFYSYNENYHMGNRLTATKERLIKMLNRKIESEMKSQWVQEAVENLSGEEIRSMQ
QDGPKEFKNSDDEYRFFARQLVMRGFNEIQQDIVRNRFLNIRGQYVSFLREVPAIYDLEA
EGISADDWQAEVDHFITLFKERQLPMADATPYLHLYDLITGRHGEREMRYVFIDEIQDYT
PYQLAYLKDSFPRAKFTLLGDLNQAIFTKDDSRTLINETSKLFDPEKTRVVQLTQSYRST
KQVTDFTKAILTSGQKIVAFNRQGPLPKLVVRPDEAGLMAALQDQLKINNEAKQTTAVIA
KTLEAAEAIYEQMKAAGIKVTLIKSENQRLAAGVIVVPSFLAKGLEFDAVVLWQINAANY
HEEDERELLYTVASRAMHRLTMLASPDVTPLLDKVPADLYERG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagaacgaacaagcaaaagagcagacacatttgacaggcatcatgaaggagctc
tccggtgccgaaagccgtctttcaaaagagatggctaagacaaagtctgaagagaagaac
atcagtgacaacttcttcaatgatttttccttgaacttcaccgactacgctgaaacgatt
gaaactgcggcctcaattcagcaacagcaacgcgtgcttgatgagcgaaccaatgcgtgg
aagcaaagcgcacagcaactcgcgactgttaagcggttgatgggcaatccgtattttgcg
cggattgatttccaagaaggccgggaaaagccggagacgatttatatcggcttaggttcc
ttcaccaatgaagctggtaagtttctcatctacgactggcgcgcgccgatcagctcaatt
tactatgatggcggtttgggcaaggttacctatcaaacgcctgatggcccgcaacaggtc
acggtttctttgaagcgtcaatttgtcattaaaaacggcaaaattcagacgatgttcgat
actaccgaaaccatcggcgatcagatgttgctggaagtgttaggcgaaaagtcagacacc
caaatgaagacgattgtgaccacgatccagcgcgaacagaaccagattatccgtgacacc
aaagcggacttattgtttgtgcaaggcgcagctggctccgggaaaaccagtgccgtgttg
cagcgggtcgcttatctgctttatcggtaccgaggcaacttgagtagtagtcaggtgatt
atgttcagtcctaaccaacttttctctgactacattagcaatgttttgccagaacttggc
gagcagaacatggtgcaattcacttattaccaatatgtcacgcgacggttaccacacatt
gatgtccaaaaccttttctctcagttcgagcaacagctaaccccagttcaaaagaaaatt
gcacgtgtcaaaggcagcttagacttttttgagacagccaagaaatatgcgacaagtctt
gaaaaatcaggcttgcgcttccgtgacattcgcttccgtggtgaggtattcttctcccgc
cggcggattcatgaaatcttttatagctacaacgaaaattatcacatgggcaatcgcctg
accgccaccaaggaacggctgatcaaaatgctcaatcggaaaattgaatccgaaatgaaa
tcgcagtgggtgcaagaagccgttgaaaatctaagcggtgaagagattcgctccatgcag
caagacggcccgaaagagtttaagaatagtgatgacgaatatcggttcttcgcccgccaa
ctggtgatgcgtggcttcaacgaaattcaacaagatattgtccgtaatcgcttccttaat
attcgcggacagtatgttagtttcttgcgtgaagtaccagctatttatgacctcgaagcc
gagggcattagtgctgatgactggcaggcagaagtcgatcattttattaccttatttaag
gaacgccaactaccaatggcagacgcaacgccatatctgcacttgtatgatttgatcact
ggtcgccatggtgaacgcgagatgcggtatgtcttcattgatgaaattcaagattacaca
ccataccagctcgcctacctcaaggacagcttcccgcgggcgaagtttacgttgctaggc
gatctcaatcaggctattttcacaaaagacgattcgcggacgctgattaacgaaaccagc
aagctgtttgatccagaaaaaacccgcgtcgtgcagttaacccaaagttatcggtctacc
aaacaggtcaccgactttacgaaagcgattctcacatctggtcaaaaaatcgtggcgttc
aatcgccaaggaccattgccaaagttggtcgttcgtccagatgaagccgggttgatggcg
gctttgcaggatcaattgaaaattaacaatgaagcgaagcagacaactgcggtcattgcg
aaaacgctggaagccgcagaagccatttatgaacaaatgaaggcggctggcatcaaagta
actttgatcaagtctgaaaatcaacgactcgcagccggcgtcatcgttgttccaagcttt
ttggctaaggggcttgaattcgatgccgttgtgctttggcaaatcaatgcggccaattac
catgaagaggatgaacgtgagttgttgtacacggtggcgtcccgggccatgcatcgacta
accatgctggctagtcctgatgtgacgccgttgttagacaaagtaccggctgacttgtac
gagcgggggtaa
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