Lacticaseibacillus paracasei Zhang: LCAZH_2559
Help
Entry
LCAZH_2559 CDS
T01280
Name
(GenBank) ribonuclease M5 (Toprim domain)
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LCAZH_2559
Enzymes [BR:
lcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LCAZH_2559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
TauD
Motif
Other DBs
NCBI-ProteinID:
ADK19749
UniProt:
A0A1J3C127
LinkDB
All DBs
Position
complement(2504088..2504657)
Genome browser
AA seq
189 aa
AA seq
DB search
MTTIKQVVVVEGRDDTKRLKETFGAIDTIETRGSAIDEATLERIRQAQAKRGVIVLTDPD
FPGEKIRKTISRAVPGVTHAFLPRREGVPDHKGSLGIEHAKPAALRAALQHLFTEMPDAP
QVISQQDLLAADLVGGVGARQRREQLGELLHIGYTNGKQLLRRLAEFQISRAAFLAAMAQ
VDGGQHDKT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgacaactatcaaacaagtcgtggtcgttgaaggccgcgatgatacgaaaagattgaaa
gaaacttttggtgccattgacaccattgaaacccgcggcagtgcaattgacgaggcaacg
ctcgaacgcattcggcaagcacaggctaaacgcggtgtgattgtgctgaccgaccctgat
ttcccgggtgagaaaatccgcaaaactatttcccgcgcggttccaggggtgacgcatgct
ttcttgccgcggcgtgaaggtgtgccggatcataaaggctcgttgggcatcgaacatgcc
aagcctgctgcgttgcgcgcagctttgcagcatctttttacagaaatgccagatgcaccg
caagtgattagtcagcaagatttgctcgctgctgatttagtcggtggtgtcggtgcccgc
caacgtcgggaacagttaggcgagttgttgcatattggctacacaaacggcaaacagttg
cttcgacgactcgcagagtttcaaattagccgcgcagcttttttggctgccatggcccaa
gtagatggaggacagcatgacaaaacctga
DBGET
integrated database retrieval system
