Lycorma delicatula (spotted lanternfly): 142319659
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Entry
142319659 CDS
T11193
Symbol
Xpd
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit Xpd
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03022
Basal transcription factors
lda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142319659 (Xpd)
09124 Replication and repair
03420 Nucleotide excision repair
142319659 (Xpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lda03021
]
142319659 (Xpd)
03036 Chromosome and associated proteins [BR:
lda03036
]
142319659 (Xpd)
03400 DNA repair and recombination proteins [BR:
lda03400
]
142319659 (Xpd)
Enzymes [BR:
lda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142319659 (Xpd)
Transcription machinery [BR:
lda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
142319659 (Xpd)
Chromosome and associated proteins [BR:
lda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
142319659 (Xpd)
DNA repair and recombination proteins [BR:
lda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
142319659 (Xpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SNF2-rel_dom
nSTAND3
DUF7239
AAA_11
Motif
Other DBs
NCBI-GeneID:
142319659
NCBI-ProteinID:
XP_075213318
LinkDB
All DBs
Position
2:219775681..219820828
Genome browser
AA seq
755 aa
AA seq
DB search
MKLYVDGLAVYFPYDYIYPEQYAYMMELKKAIDAKGHCLLEMPSGTGKTVSLLSLIVAYL
HYNPLEVTKLIYCSRTVPEIEKVVEELRKLFKYYEKNETPLNMLGLVLSSRKNLCIHPQV
SKERDGKIVDGRCHSLTASYVRERHEHDDSIPICSFYEYFDRFGREAPIAPGVYSIDDLK
QYGREMNYCPYFLARYTIQHANIVIYSYHYLLDPKIADVVSKELSKSAIVVFDEAHNIDN
VCVDSMSVKINRKILDKAGNNVQILEKTVSDMKEVDAQKLREEYNRLVEGLRDASVARET
DVILANPVLPDQVLKEVVPGNIRTAEHFISFLKRFLEYLKTRLRVQHVIQESPAGFLKDV
AQRVCIERKPLRFCAERLASLLRTLQIADQTDFSPLILITHLATLVSTYTRGFTIIVEPF
EDKAPTVINPILHFSCLDSSIAIKPVFDRFQTVVITSGTLSPLDMYPKILDFNPVIMNSF
TMTLARPCLLPMIVAKGSDQVAISSKFETREDVSVVRNYGQLLVEISSIVPDGVVCFFTS
YLYLESVVASWYDQGVIDSLQRRKLLFIETQDAAETSLALLNYIKACENGRGAVLLSVAR
GKVSEGVDFDHHLGRAVLMLGIPYVYTQSRILRARLDYLRDQFQIRENDFLTFDAMRHAA
QCVGRALRGKTDYGIMIFADKRFSRSDKRSKLPKWIQEHLKDAFCNLSTEEAVQIAKRWL
RQMAQPFSREDQLGISLLTLEQLEQDDIEERARQA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgttgatggtttggcagtatattttccatatgattatatatatcctgaa
cagtatgcttacatgatggaattgaagaaagctatcgatgcaaagggtcattgtttatta
gaaatgccttcagggactggaaaaactgtttctcttttgtctcttattgttgcatattta
cattacaatcctcttgaagtaacaaaattgatatactgttctcgaactgtaccagaaata
gaaaaggttgttgaagaattgcgaaaattatttaaatattatgagaagaatgaaacgccc
cttaatatgttgggtcttgttttaagttccagaaaaaatttatgtattcatccacaagtt
agtaaagaacgagatggtaaaatagtagacggtcgttgtcacagtctaactgcttcatat
gttcgtgaaagacatgaacatgatgattctattcctatttgctcattttatgaatatttt
gatcgatttggtcgtgaagctccaattgctccaggagtttacagtatagatgatttaaaa
caatatggtagagaaatgaattattgtccatactttcttgctcgttatactatccagcat
gcaaacattgtcatttacagttatcattatttattggatccaaaaattgcagatgttgta
tcaaaagaactttcaaagtcagctattgttgtttttgatgaagcacataacattgataat
gtatgtgtagattcaatgagtgttaaaataaaccggaaaattttggacaaagctggaaat
aatgtacagatacttgaaaaaactgtttcagatatgaaagaggtcgatgcacaaaaactg
agagaagagtataatcgtttagttgaaggtcttagagatgctagcgtagctcgagaaaca
gatgtcattcttgccaatcctgttcttccagatcaagttcttaaagaggttgtacctggt
aatattagaactgctgaacattttattagcttcttgaaacggtttctggaatatttaaaa
acaagattacgtgtacaacatgttattcaggaatctccagccggatttttaaaggatgtt
gcacaaagagtctgtattgaaaggaaacctttacgtttttgtgctgaacgtttagcttct
cttttgcgaactcttcagattgcagatcagactgatttttcaccacttattcttataaca
catttggccacacttgtttcaacatataccagaggatttacaataattgttgagccgttt
gaagataaagcacctactgttataaaccctatattgcatttcagctgtctagattcatca
attgcaatcaagccagtatttgacagatttcaaactgttgtgattacgtcaggtacatta
tcacctcttgatatgtacccaaaaattcttgattttaatccagttataatgaactcattt
acaatgacgctagccagaccttgcctcctacctatgatagtagcaaaaggaagtgatcag
gttgcaatttcctccaagtttgaaactagagaagatgtatctgttgtaagaaattatgga
caacttcttgttgaaattagctcaattgttcctgatggagttgtttgtttttttacttca
tatttatatttagaatctgtagtagccagttggtatgatcaaggtgtcattgattcacta
cagagacgaaaattactttttattgaaacacaagatgcagctgaaacaagccttgccctt
ttaaattatataaaggcatgtgaaaatggtagaggtgctgttctgttgtcagttgctcgt
ggtaaggtatctgaaggtgtagattttgatcatcatcttggaagagcagttcttatgttg
ggaattccttatgtctacacgcagtcaagaattcttcgagctcgtcttgattatcttaga
gaccagtttcagattagagaaaatgattttttaacatttgatgccatgaggcatgccgct
caatgtgttggccgtgcattgagaggaaaaactgattatggcatcatgatatttgctgat
aagagattttctcgctcagataaacgaagtaaattaccaaaatggattcaagagcatttg
aaagatgctttttgcaacctttctactgaggaagctgtacaaatagcaaagaggtggttg
aggcagatggcacaaccatttagccgagaagatcagcttggaatatcattacttacttta
gagcagttagaacaagatgatattgaagaaagagctcgtcaagcttaa
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