Lycorma delicatula (spotted lanternfly): 142321349
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Entry
142321349 CDS
T11193
Symbol
Mtr4
Name
(RefSeq) exosome RNA helicase Mtr4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142321349 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lda03019
]
142321349 (Mtr4)
03041 Spliceosome [BR:
lda03041
]
142321349 (Mtr4)
03009 Ribosome biogenesis [BR:
lda03009
]
142321349 (Mtr4)
03016 Transfer RNA biogenesis [BR:
lda03016
]
142321349 (Mtr4)
Enzymes [BR:
lda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142321349 (Mtr4)
Messenger RNA biogenesis [BR:
lda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
142321349 (Mtr4)
Spliceosome [BR:
lda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
142321349 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
142321349 (Mtr4)
Ribosome biogenesis [BR:
lda03009
]
Eukaryotic type
Pre-60S particles
Helicases
142321349 (Mtr4)
Transfer RNA biogenesis [BR:
lda03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
142321349 (Mtr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
ATPase_2
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
142321349
NCBI-ProteinID:
XP_075215479
LinkDB
All DBs
Position
3:3188452..3249382
Genome browser
AA seq
1058 aa
AA seq
DB search
MADFGADLFDAFDENVDEEEDSDSSYLQKPKNVETEGSKTITLEEVTDYEVINTAEIKSE
PLDVDEDQVAIFDRTSGVKRKLEDEFSNKNVKEVKLETESFLDDINLEELSTRIKVLTVE
TLERCTHEVAIPPDVEYIPLRPPTGKPAKEYQFILDPFQKEAILCIDNNQSVLVSAHTSA
GKTVVAEYSVAQSLRDKQRVIYTTPIKALSNQKYREFYEEFRDVGLITGDVTINPSASCL
IMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRNKERGVVWEETLILLPDNVHYVFLSAT
IPNARQFAEWVAHLHHQPCHVVYTDYRPVPLQHYIFPSGGDGIHLIVDEYGQFREDNFNM
AMKVLANAGDAAKGDKDRGRKGGNKQGPDNNCFKIVKMIMERNFAPVIVFSFSKKECEIY
ALMMAKLSFNNAEERELVDEVFNNAMNVLSEEDRTLPQVENVLPLLRRGIGIHHGGLLPI
LKETIEILFSEGLIKALFATETFAMGLNMPARTVLFTNARKFDGKESRFLTSGEYIQMSG
RAGRRGLDDKGIVILMIDERMTSSVGKEILQGEADPINSAFHLTYNMVLNLLRVEEINPE
YMLERSFFQFQNQATIPELVNSVKTFQEKEFSMKIPKESQLASYYSIREQLQNLSSQFQS
YLTKPEYLVPFLQPGRLVKVKTGNDEYDWGIVINFKKQHGGAGGKNPATNKGGVDIDVLL
NLKESQQDGPPRPCPVEENGEVEIVCVSHTAINQISSVRLYHPADLKLRERRKSVLQTIR
EVKKRYPEGIPLLNPVDDMKIKDTAFKQICSQIELYEGRLYEHPLHNSSDLKPLYSLYVE
KMKVSKLLKDAKQELKKAMSLLHMDELKCRKRVLRRLGYCTSADVIEIKGRVACELSSGE
ELLLTEMVFNGLFNDLTVPQIVALLSCFVCDEKSNEMPKRSEELRGPLRKMQELARRVAK
VSIESKLDLKEDDYVESFKPFLMDVCYAWCQGSSFLQICQMTDIFEGSIIRCMRRLEELL
RQMVQASKNIGNTDLENKFSEAIKVMKRDIVFAASLYL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttggagctgatttatttgatgcatttgatgaaaatgttgatgaagaggaa
gattctgattcaagttatttgcaaaaacctaaaaatgttgaaactgaaggatctaaaaca
attactttagaagaagtaactgattatgaagtaataaatactgctgaaataaaaagtgaa
ccactagatgttgatgaagatcaggtagcaatttttgacagaacatctggtgtaaaacga
aaattagaagatgaattttcaaataagaatgtaaaagaagtgaaattagaaaccgaaagc
tttctggatgatatcaatttggaagaactttctactagaatcaaagttcttactgttgaa
acattggaacggtgtacgcatgaagttgcaattcctccggatgtggaatacatcccgtta
cggcctccaactggcaagcctgctaaagaataccaattcatccttgatccttttcagaag
gaagcgattctctgtattgataataatcagtctgtacttgtgtctgctcatacatctgct
ggaaagactgttgttgcggaatacagtgtggcacagtctttacgagacaaacagcgagtt
atttatacaactcctattaaagcgcttagtaatcagaaatacagagaattttatgaagaa
tttagagatgttggtcttataacaggagatgtaactattaatccatctgctagttgttta
attatgactacggagatattgagaaacatgttatatcgtggctctgaaataatgcgtgaa
gtagggtgggtagtatttgatgagatccattatatgcgtaataaggaacgtggtgttgtt
tgggaagagactctgatcttgttaccagataatgttcattatgtcttcttatctgccaca
attcctaatgcacgtcagtttgctgaatgggtcgctcatcttcatcatcaaccttgtcat
gttgtgtacactgattatcgacctgtacctttacagcattatatttttccatctgggggc
gatggaattcatctaatagttgatgaatatggtcaattccgtgaggataatttcaacatg
gccatgaaagtattggcaaacgctggtgatgctgctaaaggagataaggatcgtggaaga
aaaggtggtaataaacagggtccagataataactgcttcaaaattgtaaagatgattatg
gaaaggaattttgctccagttattgtattttcttttagtaaaaaagaatgtgaaatctac
gcattgatgatggctaaactcagttttaataatgcggaagaaagggaactagttgatgaa
gtatttaacaatgctatgaatgtactttctgaagaagatcgtaccttacctcaagttgaa
aatgttttgcctctcttacgcagaggtattggtattcaccatggaggacttttgccaata
cttaaggaaacaattgaaattttgttttctgaaggtttgattaaagcattatttgctaca
gaaacttttgctatgggattaaatatgcctgctcgcactgtcttatttactaatgcaaga
aaatttgatggaaaggagtcacgatttttaacatcaggagaatatatacaaatgtctggt
agagcaggtcgtcgtggccttgatgataaaggaatagtaattttaatgatagatgaaagg
atgacatcttctgttgggaaagaaattcttcaaggggaggctgatcccattaattctgca
tttcatcttacttacaatatggttcttaatttattgcgagttgaagaaataaatcctgaa
tacatgttagaaagaagtttctttcagtttcaaaatcaggctaccattccagaattagtt
aatagtgtgaagacatttcaagaaaaggaatttagcatgaaaatacctaaggaatcccaa
cttgcttcatactatagtattagagaacagttacaaaatcttagttcccagtttcagtca
tacttaacaaagccagagtatttagtaccatttctacaacctggacgtttagttaaagta
aagaccggtaacgacgagtacgactggggtattgtaattaattttaaaaagcagcatggt
ggagcaggcggtaagaacccagcaactaataaagggggtgttgatattgatgttttatta
aatttgaaagaaagtcagcaggatggaccaccacgtccttgccctgttgaagaaaacggt
gaagtagaaattgtttgcgtatctcatacagctattaatcagattagttctgttaggttg
tatcatccggccgatttaaaactacgtgaaaggagaaagtctgtattacaaacaattcgg
gaagttaaaaagaggtatccggagggcattccacttttgaatcctgttgatgatatgaag
ataaaagatactgcatttaaacaaatttgctctcagattgaattatatgaaggtcgctta
tacgaacatccattacataacagttctgatctcaagccactgtattccctttatgtggaa
aaaatgaaggtttcaaaacttctgaaagatgcaaaacaggagttaaagaaagctatgtct
ttattgcacatggatgaactaaaatgtcgtaaaagagtattaaggcgactaggttactgt
acatcggctgatgttatagaaataaaaggacgtgttgcatgtgaattgagtagcggagag
gaattgttattaacagaaatggttttcaacggtctctttaatgatctaacagttcctcaa
atcgttgcccttcttagttgtttcgtctgtgatgagaaaagtaatgagatgccaaagaga
tctgaggaactgagaggtcctcttaggaaaatgcaggaactggctcgtcgtgtcgccaaa
gttagtatagaatcaaaattagatttaaaagaagatgattacgtagaaagttttaaacca
ttcttaatggatgtttgctatgcatggtgccaaggaagttcttttctacaaatatgccaa
atgactgatatatttgaaggaagtatcattcgatgcatgcggaggttagaagaattgctt
agacagatggttcaagcttcaaagaatatcggtaacacagatttagaaaataaatttagt
gaagccattaaggttatgaagagggacattgtttttgctgcaagtttatatctatag
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integrated database retrieval system
