KEGG   Lycorma delicatula (spotted lanternfly): 142321936
Entry
142321936         CDS       T11193                                 
Symbol
Polr2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit Rpb5 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lda  Lycorma delicatula (spotted lanternfly)
Pathway
lda03020  RNA polymerase
lda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142321936 (Polr2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    142321936 (Polr2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lda03021]
    142321936 (Polr2E)
   03400 DNA repair and recombination proteins [BR:lda03400]
    142321936 (Polr2E)
Transcription machinery [BR:lda03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     142321936 (Polr2E)
  RNA polymerase III system
   RNA polymerase III
     142321936 (Polr2E)
  RNA polymerase I system
   RNA polymerase I
     142321936 (Polr2E)
DNA repair and recombination proteins [BR:lda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      142321936 (Polr2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 142321936
NCBI-ProteinID: XP_075216580
LinkDB
Position
3:119107494..119152742
AA seq 210 aa
MDDEAETYKLWRIRKTVMQLCHDRGYLVTQDELDQVLDAFKEQFGDKPSEKRPARSDLIV
LVAHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQDENIHRAIIVVQQGMTPSAKQSLVD
MAPKYILEYFLESELLINITEHELVPEHVVLAPEEKQELLTRYKLKENQLMRIQAGDPVS
RYFGLKRGQVVKIIRSSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagctgaaacatacaaattatggagaattaggaagacagttatgcaactt
tgccatgacagaggttatttagttacccaggatgaattggaccaggttcttgatgctttt
aaagaacagtttggtgataaacctagtgaaaagagacctgcaagaagtgatcttatagtt
cttgttgcacacaatgatgatccaacagatcagatgtttgttttttttcccgatgagcct
aaaattggcattaagacaattaaaacctattgtcaacgtatgcaagatgagaacatacat
agagcaattatagtggtgcagcagggtatgactccttcagctaagcagtctctggttgat
atggctccaaaatatattctggaatatttcctggaatcagaattgcttataaatatcaca
gagcatgaattagttcctgaacatgtagttttagctcctgaagaaaagcaagaactgctc
actagatataaactgaaagagaatcagttaatgagaatacaagctggagaccctgtttca
agatattttggacttaaaagaggacaagttgtgaagattattcgttcatcagagacagcg
ggaagatatatttcataccgtttagtttgctaa

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