Lycorma delicatula (spotted lanternfly): 142322847
Help
Entry
142322847 CDS
T11193
Symbol
Patr-1
Name
(RefSeq) protein associated with topo II related - 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142322847 (Patr-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lda03019
]
142322847 (Patr-1)
Messenger RNA biogenesis [BR:
lda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142322847 (Patr-1)
mRNA degradation factors
5'-3' decay
Decapping complex
142322847 (Patr-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
142322847
NCBI-ProteinID:
XP_075218041
LinkDB
All DBs
Position
4:47865404..47923413
Genome browser
AA seq
747 aa
AA seq
DB search
MTNPFDYNDNTTNNEWLTDDEDDEAYDAKNDETFGDSCLENGDWEHDHEILAKITELSRQ
NSNQKNDDTGELSKKVASCILDDDGPEPTTSRSPKQPTSDFFDSVNAKFPPFVNFPAKMC
YVEDIERNIRDRMNTPVPNSSRQDELPLPLVNTRRAEDIERDLPQALLGIVKPQIQPASH
LPTVQQVPVSRRPNNPPPFVTAAPPQALQVINSVYCRNSVLPIMPPNQAMGHPPNQAMGH
PPNQALGHPPNQALGHPPNQALGHPPNQALRRPSMTHNGLTSVQMGRGLPPPPHNGTLGG
VPNIVNQQFGFQQARMFFPAPDHPPQPQQPPPPASLSLFHMPPPQLQQRNRQYNDAYSSW
RPNNPPADVSNVDEYAGLMTEHDKNWLAQIQMLQLNNLHPYQDDYYFTMHQSRQQGTGAR
SKLGGPNINKMSREPQATKTYTPQQFENSLGKLQVGSVTAPRKIIDTDVVESVNPSENHC
TNLYSPQEAGAAARSSSTSAASSSSTFSSVTRIKAVLLEIEMLYTLVLKGEDFLHPLSGV
VMEEGCNPYKLFNDVAKRMLRDNKLLLFIASSKGKKLLLRVMPHLTMDLMEEILRVIVYG
MTLLSRKDIEQCMLQLLPYIRKWIMTLNFSTLVDIAKMHDSDTNYILTNTFTISVLANMI
ERAETILENTTDYKDSEVVQWFNFIEKFVNNCPPSIELERPVVALEASILHRHLDRNRLI
NPSSSNSDRTSNLIKALCIITDVNRRQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcctttcgattataacgacaacactactaacaatgaatggctgactgatgat
gaagatgatgaagcttatgatgctaaaaatgatgaaacatttggagattcatgtctagaa
aatggtgactgggaacatgaccatgagatcttagcgaagataacagaattgtctaggcag
aatagcaatcagaaaaatgatgacactggtgaacttagtaaaaaagttgcgtcttgcatc
ttagatgatgatgggccagaaccaactacatcaagatcaccaaagcagcctaccagtgat
ttctttgactcagtaaatgcaaagtttcctccttttgtaaatttccctgcaaaaatgtgc
tacgtggaggacattgaacgtaatatccgggacagaatgaacacacctgtaccaaattca
tctcgtcaggatgagttgcctcttcctttagtaaatacacgtcgtgcagaagatattgaa
agagacttgccacaggccctactaggaattgtaaagccacagattcagccagcatcacat
ctacctacagttcaacaagttcctgtttcaagaagaccaaacaatccaccaccttttgta
actgctgcacctcctcaagctcttcaagtgatcaactcagtttattgcagaaacagtgtt
ctgccaattatgcctccaaaccaggcaatgggtcatcctccaaaccaagcaatgggccat
cctccaaatcaagctctaggacatcctccaaatcaagctctaggacatcctccaaatcaa
gcactaggacatcctccaaatcaagcactgagacgtccttctatgactcataatgggctt
acatcagtccagatgggccgagggttaccaccgcctccccataatggaacacttggtggt
gtgcctaatatagttaatcaacagtttggtttccaacaagctagaatgttttttcctgct
ccagaccatccaccgcagccgcaacagccaccgccacctgcttccctttcattattccac
atgccaccacctcaactgcagcagcggaatcgccagtacaatgatgcatattcatcatgg
cgaccgaacaatcctccagctgatgtatcaaatgttgatgaatatgcaggccttatgact
gaacatgacaaaaactggcttgcacagattcagatgttacagttgaacaatcttcatcct
tatcaggatgattattattttacgatgcaccaatcacgacaacagggcactggggctcgc
agtaaactaggaggaccaaatattaataaaatgtcacgagagccacaagcaacaaaaaca
tacactccacagcagtttgaaaattctcttggaaagctacaagttggaagtgttactgct
ccaagaaagatcatcgacacagatgtagtagaaagcgtaaatccttctgaaaaccattgt
accaacctatattcacctcaggaagctggagcagctgccagatcatcctctacttctgct
gctagttctagttctacattttctagtgtaactagaattaaggctgtattattagaaatt
gagatgctttatactttagtattaaaaggtgaggatttccttcatcctctttctggagta
gttatggaagagggttgcaatccatataagttatttaatgatgttgctaaacgaatgcta
agagataacaaactgttactttttattgcatctagtaaaggaaagaaactattattacga
gttatgcctcatttgacaatggatttgatggaagaaattctaagagtaatagtgtatgga
atgacactgttatcaagaaaggatatagaacagtgtatgttacaattattaccttatatt
aggaaatggattatgactctaaatttcagtacacttgttgacattgcaaaaatgcatgac
tccgatactaattatattttaacaaacacatttacaatttcagttttggctaacatgatt
gaaagagcagagacaatcctagagaatacaactgattataaagatagtgaagtcgtacag
tggtttaattttatagaaaagtttgtaaataattgtccaccaagtattgaattggaacga
ccagttgtggcattagaagcaagcattttacatcgccatttagataggaataggctcata
aacccttcttcttccaacagtgatagaacttcgaatttaattaaagctttgtgcattata
actgatgtcaacagacgtcagtaa
DBGET
integrated database retrieval system
