Lycorma delicatula (spotted lanternfly): 142324153
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Entry
142324153 CDS
T11193
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03030
DNA replication
lda03410
Base excision repair
lda03420
Nucleotide excision repair
lda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142324153 (DNAlig1)
03410 Base excision repair
142324153 (DNAlig1)
03420 Nucleotide excision repair
142324153 (DNAlig1)
03430 Mismatch repair
142324153 (DNAlig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lda03032
]
142324153 (DNAlig1)
03400 DNA repair and recombination proteins [BR:
lda03400
]
142324153 (DNAlig1)
Enzymes [BR:
lda01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
142324153 (DNAlig1)
6.5.1.6 DNA ligase (ATP or NAD+)
142324153 (DNAlig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
142324153 (DNAlig1)
DNA replication proteins [BR:
lda03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
142324153 (DNAlig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
142324153 (DNAlig1)
DNA repair and recombination proteins [BR:
lda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
142324153 (DNAlig1)
NER (nucleotide excision repair)
Other NER factors
142324153 (DNAlig1)
MMR (mismatch excision repair)
Other MMR factors
142324153 (DNAlig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
142324153
NCBI-ProteinID:
XP_075220976
LinkDB
All DBs
Position
4:186940973..187058304
Genome browser
AA seq
1054 aa
AA seq
DB search
MLKLVYNSKLFSVCTVKKIDKVYVISNYIYCQSLSSFCHRSLLHRYVLSMWYRTVNSDGN
SEVSEVSTNRPSTSQESPVENIAIKRKRVDGDESGSDNDQEPLIICEGRDLTEAEKDSLI
IKPDEKKVRLVSNVVYDGIPLRRCAGTPADSLNLTKRLVEQQKKKMNGVDGIEKKSAKVI
EENKTDAVNYDKELINDSKDEVENTVINVQKREISKSPVKQNEVISEVDKEKIKTEMEKF
DDSSVEDSPVKLSRTNRKKNKILSDDSDDSNDAVPEKKSKISPKKESSKKNPKSSKESVF
PKKSPKDEKKKTNSANYNNKGNVRKSLQDFFAPKKAVDKTVNKEKEENKENKKKESAEIL
TEKTVNKEEKRENKSNVTVESNEPKANISNECDNDTKDLDYYPSKPKYHPIDDASWKHGE
KVPYMALARTMECIEAIRGRLKIIEILSNYFRSVIILSPKDLIPSVYLCLNKVAPDYHNI
ELGIAETSLIKAIGQSTGRSIAQIKADVASTGDLGIVAEQSRSNQRVMFKPAPLTVRFVF
EKLKDIAQMTGQASMTKKLDKIQSLFIACRSSEARFLIRSLAGKLRIGLAEQSVLQALAV
ACVNTPPGQEYPPKILDASNSLSQETFKSRVDEESLIIKSTYCECPNYDLVLPVLLEKGV
KALPEHCHLTAGIPLKPMLAHPTKGVHEVLRRFDGLKFTCEWKYDGERAQVHRSEDGKIN
IYSRNQENNTSKYPDIISKLPSCLGPNVKSCILDTETVAWDIKNKKIMPFQILSTRKRKD
ATESEIKVQVIVFIFDLLYLNGRSLVKEPLAERRRLLKENFVEVEGKFSFAKSMDSTTME
DVQEFLEESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLEGVGDTLDLVVIGGY
LGRGKRTGCYGGFLLACYDPNSEEYQSICKIGTGFSDEDLQKHSEYFKEHVIEKPRPYYR
YDNSHEPDHWFDPSQVWEIKCADLSLSPAHRAAIGIVDPEKGISLRFPRFLHIREDKKVE
DATSARQVADMYLNQDQIKNQQGDGNRAAEEDFY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattagtgtataattccaaattgttttcagtatgtactgttaaaaaaatagat
aaagtgtatgtgatcagtaattatatttattgtcagtctttatcatcattttgccatcgt
tcacttcttcatcgctatgttttatcaatgtggtacagaactgttaattctgatggcaac
tctgaagtgtctgaagtatctacaaataggccaagtacatctcaagaatcacctgtcgaa
aatattgccataaagaggaaacgtgttgatggtgatgaaagcggtagcgataacgatcaa
gagccactcataatatgcgaaggaagagatcttaccgaagctgaaaaagattcattaatt
ataaagccagatgaaaaaaaagtacggttagtcagtaatgttgtatatgatggaattcct
ttacgaagatgtgctggtacacctgctgatagtttaaaccttactaaaagactcgttgaa
caacaaaagaaaaaaatgaatggtgttgatggcattgagaaaaagtcagcaaaagttatt
gaagagaataaaactgatgctgttaattatgataaagaattaattaatgatagtaaggat
gaagttgagaatacagttatcaatgttcagaaaagagaaatatcaaaatctcctgtaaaa
caaaatgaagtaatttcagaggtggataaggagaaaataaagactgaaatggagaaattt
gatgactcatcagtagaagatagccctgtaaaattaagtagaacaaatagaaaaaagaat
aaaatcctgtcagatgattctgatgattctaatgatgctgtacctgaaaagaaatccaaa
atttctcctaaaaaagaatcttcaaagaaaaatcccaaatcttctaaagaatctgtattt
cctaagaaaagcccaaaagatgaaaagaagaaaacaaattcagccaattataataataaa
ggaaatgttagaaagtcgttacaagacttttttgcacctaaaaaagcagttgacaaaaca
gtaaataaagagaaagaggaaaataaagaaaataaaaaaaaagagtctgctgaaatacta
actgaaaaaactgttaacaaagaagaaaaaagggaaaataagagtaatgtaactgttgaa
agtaatgaaccaaaagctaacatttctaatgaatgtgataatgatacaaaggatctagat
tattatccatccaaacctaaatatcatccaattgatgatgcctcttggaaacatggtgaa
aaggttccatacatggcattagctcgtacaatggaatgtatagaagctatcagaggtcgt
ttgaaaatcatagagatactttcaaattattttagatctgtcattattttaagcccaaaa
gatttaataccgtctgtttacttatgtcttaataaagtagcaccagattatcataacatt
gaattaggtattgctgaaacttcattgataaaggctattggacaaagcactgggcgcagt
attgcacaaattaaagctgatgtagctagtactggcgatcttggaattgttgcagaacaa
agtcgttcaaatcaacgtgttatgtttaagccagctccactgacagttagatttgtattt
gagaaactgaaggatattgctcaaatgacaggccaagcatctatgactaagaagctagat
aaaattcagtcgctttttatcgcttgtcgttcttcagaagcaaggtttcttattagatct
ttagctggaaaattaagaattgggcttgcagaacagtcagttcttcaggcattggctgtt
gcttgtgttaatacacctcctgggcaagagtatcctcctaaaatattggatgcttctaat
tcattatcacaagaaactttcaaatcacgtgttgatgaagagtcccttattattaaaagt
acttattgtgaatgtccaaattatgatttggtactaccagtattacttgaaaaaggtgtt
aaagcgttacctgaacattgtcatttaacagctggtataccattaaaaccaatgttagca
catcctaccaaaggagttcatgaagtacttcgtagatttgacggtctgaaatttacttgt
gaatggaagtatgatggtgagcgtgcacaggtacaccgcagtgaagatggaaaaataaac
atttatagtaggaatcaagaaaataatacttcaaagtatccagatattatttcaaaatta
ccatcttgtcttggtccaaatgtaaaatcgtgtatacttgatacagaaactgttgcatgg
gatattaaaaataaaaaaattatgccattccaaatcttatctactagaaaacgaaaggat
gctacagaatcagaaataaaagtacaagtcattgtttttatatttgatttattatatctt
aatggaagatcattggttaaagaaccattagctgaaagaagacgtcttcttaaagaaaat
tttgtagaagttgaaggtaaattttcatttgctaagagtatggatagtacaacaatggaa
gatgttcaagaatttttagaggagtcagtgaaaggcaattgtgaggggcttatggttaaa
acattagaagaagaagcaacatatgagattgccaaaaggtcacggaattggttaaaatta
aagaaagattatctggaaggtgttggtgatacattagatttagttgtaattggtggttat
ttaggtcgtggcaaaagaactggttgttatggtggatttttattagcatgttatgatcct
aacagtgaagaataccaaagtatttgtaaaattggaacagggttcagtgatgaagacctt
cagaaacattctgaatactttaaagagcatgttattgaaaaaccaagaccttattataga
tatgataattctcatgaacctgatcattggtttgatccgagtcaagtgtgggaaataaaa
tgtgcagatctatcattatcacctgctcatcgagctgctataggaatcgttgatcctgaa
aagggaatctccttgaggtttcctagatttttacatataagagaagataaaaaagttgaa
gatgctacttcagctagacaggttgctgacatgtacttaaatcaagatcagattaaaaat
caacaaggagatggaaatagagcagctgaagaagatttctattag
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