Lycorma delicatula (spotted lanternfly): 142327332
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Entry
142327332 CDS
T11193
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lda03041
]
142327332
Enzymes [BR:
lda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142327332
Spliceosome [BR:
lda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142327332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
nSTAND3
HA2_N
Ank
AAA_22
SRP54
AAA_11
Ank_3
ResIII
Ank_5
AAA_19
Lumazine_bd_2
NACHT
T2SSE
NTPase_1
AAA_23
Motif
Other DBs
NCBI-GeneID:
142327332
NCBI-ProteinID:
XP_075226388
LinkDB
All DBs
Position
1:complement(198737081..198927516)
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AA seq
1470 aa
AA seq
DB search
MPKRKSCNKTQHAVVGEDVRRATNLALQKFLSSNSKEYEFPSSLLASERAYVHDIARMLN
LRSKSRGTGLNRYITVYKREGSTIVQEDAHFNLSRNSRSSVMNLLNKYPLSVKEKQDVMP
LTERDRNFAPEGSVKDSSKQIGRLSSGVPLIPSSTAVNQELLAHRQSLPLWPQRESIMQC
INDNPVVIISGETGSGKTTQVPQLIMEYHNTVARACRIICCEPRRISAVMTAERVALERN
IKLGTEVGYQIRHESRISPNTVLIYCTNGVLLRTLMGNDSGIATVTHLLIDEVHERDRFT
DFLLITLRDVVSKYRSIKLILMSATLDTQVFSKYFNNCPVLTVPGRLYEVHEYFLEDILK
RTGFMTKEMIKVKRDWDKKKQQKTELDKWVSSMANMSLDDKKGSNVNNSNTSYHNSSSIP
TPILGQHADNYQTEKPLQEWVIQDMDTYLEQAWLKGDEESEQAFKQLLCLIRSENVSVDY
QHTNTGVTPLMVAAGRGRIDFVDQLLTLGASLTIEASNNFTALKFAAIMKRDNVVDLLNA
YMIMFLCKVTETFPAGHTSSGVGVNVQLSEEDSQLLEIYKKCFNNEENINCDLIISIINE
IQSSNKKGSVLVFLPGYDDIISVRDKIKTREPKSKEMKINLMTLYSKMSTNDQKRVFLPS
PPGVRKIILSTNIAETSITIDDVVFVIDCGRVKERCFDSLSGVTMLKSMKISQACARQRR
GRAGRSQAGVCYHLFSSIEYREMQQFQTPEILRTPLHELCLQTKLLAPPNTPIADFLAKA
IDPPSFMVTRNAVQLLKTIDALDAWEDLTQLGHHLLDLPVDPHLGKMLLYSVVLKCVDPV
LTIVASLSYRDPFIMPDLPQSKRAVAEIRKKFGARTFSDHMVLLRTFQGWLIAKEKGSSK
QFCEQNFLNEATLEMILSHRAQILQQMRCAGFVKNRGTHNQGQVLGDMKDLNTNSENWAL
VKAALTGGLYPNLARADREAAHNTLRTQREFKVLLHPSSTLRDTTRGGIAQAHSAAVASF
PSDWVLFEELSRVGNLCHIRMCTVVSPITVAIFAGPARLPADCLSDPETMDPGSDSEEEE
VTEGKTAILKLDEWVMFRIDPESAKLALTLRFKWHALLMKKLRAPNKPSSQADDNLVSSI
MAILSEEESLIGLQQPSGIGARPKQFSVDSYNPGHRMNETEDSAFLSSIENLGNRFTNQR
RHHEYSPSKNYGEKSDCNSIKSYSSASPSPTPSHGSATDSPHSGSTVTVGTGSGIGATGT
VGARYFVIKASPKTTESTILNLSAKVWPFTANTEKKVVRAFKEGFTVILVFGIQGSGHFQ
GYARLINDKPDVTDTLTSTLDLSGTNFNPPLPIEWIKRGDIPFNCTRHLLNPYNDHNKVQ
TSRDGQEIEPNVGERLCHLWDKMPPPVQWVSKNTSVSPQNVFHQMSGGGVGFGRPIRGPY
QPHHNQHQYQHTNNSYSLPPPPYLNQQRKT
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagaaaaagctgtaataagacgcagcatgctgtggtgggtgaagatgtgaga
agagcaactaatttggcattgcagaagttcctgagcagtaattccaaagaatatgagttt
ccatcatcattgttggcatcagagagggcgtacgtacatgacattgctagaatgttaaat
ctgagatcaaagagcagagggactggtttgaatcgttacataacagtttataaaagagaa
ggatcaacaattgtacaggaagatgcacatttcaatttgtcaaggaattctagaagtagt
gttatgaatttattaaataaatatccactctcagtgaaagaaaaacaagatgttatgccg
ttgactgaaagagacaggaattttgcacctgaaggttcagtaaaagacagttcaaaacag
ataggacggctaagtagtggtgtccctttgataccatcatctactgcagttaatcaggag
ttattagcacacagacagtccctaccattatggccacagcgtgaaagtattatgcagtgt
attaatgataatccagttgttattataagtggtgagactggctcaggaaagacgactcag
gtacctcaacttataatggaataccataatactgttgcaagagcttgcagaattatctgc
tgcgaaccccgaagaatatcagctgtaatgactgcagaaagagttgctttggaaagaaat
attaaacttggtactgaagtgggttaccagattagacatgaaagtcgaatatcaccaaac
actgttcttatctattgtacaaatggtgtgttacttcgtacactaatgggtaatgattca
ggaattgctactgttactcacttattaattgatgaagttcatgaacgtgacagatttact
gacttcttattaataacattgagagatgttgtatcaaagtacaggtcaattaaattaata
ttgatgtctgctactcttgatacacaggttttctcaaaatacttcaataattgtcctgtt
ttgacagttcctggaagattatatgaagtacatgaatacttccttgaagatatattgaaa
aggactgggtttatgacaaaggagatgattaaggtgaaaagagattgggataagaagaaa
caacagaaaacagaacttgataagtgggtttcatcaatggcaaatatgagtcttgatgat
aaaaaaggctctaatgtcaataattcaaataccagttaccacaattcatcaagtatccca
actcctatattaggacagcatgctgataattatcaaacagaaaaaccactccaggagtgg
gttatacaggatatggatacatatttagaacaggcctggcttaaaggagatgaagaatct
gaacaagcgtttaaacagctactgtgtttgattcgatctgagaatgtctctgtcgactac
cagcatactaatactggtgtcactcctcttatggtagctgctggcagaggtcgtattgat
tttgttgatcaactattgacgcttggagcatcattaactattgaagctagtaataatttt
actgctttaaagtttgctgctataatgaaacgagataatgtagttgacctattaaacgct
tatatgataatgtttctgtgtaaagttactgaaacttttccagcaggtcacaccagtagt
ggtgttggggtaaatgttcagttatctgaagaggatagtcaactattggagatatacaaa
aaatgttttaacaatgaagaaaatattaattgtgatcttataatatcaataattaatgaa
atacagtcttctaacaaaaaaggatcggttctggtatttttaccaggttatgatgatata
atttctgttcgtgataaaatcaagaccagggaacctaaatctaaggagatgaaaataaat
cttatgactttgtattcaaagatgtcgacaaatgatcagaaaagagtgtttctaccatca
ccaccaggtgttcgaaaaattatattatctactaatattgcagagactagtatcacaatt
gatgatgtagtgtttgtcattgactgtggtagagttaaagagagatgttttgactcatta
tctggtgttacaatgcttaagtcaatgaaaatatctcaggcatgtgccagacagcgaaga
ggtagagctggaagatcacaggctggtgtatgttatcatctgttttctagtattgagtat
cgtgaaatgcaacagttccagacaccagagatacttcgtacacctttacatgagttatgt
ttgcagaccaaattactagctccaccaaatactccgatagctgatttcttagctaaagca
attgatccaccttcatttatggttactagaaatgctgttcagttgctcaagacaatagat
gccttggatgcatgggaagatcttacgcagttagggcatcatttattagatctaccagtt
gatccccaccttggcaagatgctactctattctgtggtacttaaatgtgttgatcctgtt
ttaactattgttgcatctctttcgtacagggatccatttataatgcctgatttgccacaa
tcaaaacgggctgttgctgagatcagaaagaagtttggtgctagaacgttcagtgatcat
atggttttactgcggacatttcagggttggctaatagcaaaggagaaagggtctagtaag
caattctgtgaacagaatttcttaaatgaagctactttagaaatgatattgtcccatcga
gctcaaattttacagcagatgagatgtgctggttttgttaaaaacagaggaactcacaat
caaggacaagttcttggtgatatgaaagatctaaacacaaactctgaaaattgggctctt
gttaaggctgctttaactggtggactttatccaaacttggcgagagcagatagagaggca
gctcataatactttgcgaactcaacgagagtttaaagtgctgttgcatccttcatcaaca
ttacgtgatacaactcgcggtgggattgctcaagcacacagtgcagctgttgcatctttt
ccttcagattgggttttatttgaagagttaagtagggttggtaatctgtgtcacattcgc
atgtgcacagttgtttctcctataactgttgctatttttgctggaccagctcgcttacct
gcggactgcttatctgaccctgaaacaatggatcctggcagcgacagtgaagaagaggaa
gtcacagagggaaagacagccatattaaaattagatgaatgggtcatgttccgtattgat
cctgaatcagctaagctagcattaactctaagattcaaatggcatgctttactaatgaag
aaattaagagctccaaataaaccttctagtcaggctgatgataatctagtaagtagtata
atggccatactctcagaggaagaatctttgattggactgcagcaaccatctggtattgga
gcacgtcctaagcaattctcagttgatagttataacccaggtcatcgtatgaatgaaaca
gaggacagtgcatttctgtctagtattgaaaacttgggtaatcgttttaccaatcagagg
aggcaccatgaatattcaccatcaaaaaattatggtgaaaaatcagactgcaatagtatc
aaatcctacagcagtgctagtccatctcctacaccttcacatggcagtgctactgactcc
ccacatagtggttcaactgtaactgtaggtactggatctggaattggtgcaacaggtact
gtaggtgctcgatactttgtcattaaggcttctcctaagacaactgaatcaaccatatta
aatctttctgctaaggtctggccatttactgctaacacagagaaaaaagttgtacgggct
tttaaggaaggctttactgtgatattagtctttggcatacaaggcagtggtcactttcaa
ggctatgctcggttaattaatgataagcctgatgtaacagatactttaacctcaacactg
gatcttagtggtactaatttcaatcccccgttgcctattgaatggattaaacgtggtgat
attccatttaattgtacaagacatctactgaatccttataatgatcataataaagttcaa
accagccgtgatggtcaagaaattgaaccaaatgttggtgaaaggttgtgccacttgtgg
gataagatgccacctccagtacagtgggtgtcaaaaaatacatcagtttcaccacagaac
gtattccaccaaatgtctggtggaggtgttgggtttggtcggccaattcgaggtccttat
cagcctcatcacaaccagcatcagtatcagcacacaaataattcatattctcttccacca
ccgccttaccttaatcagcaacgaaagacataa
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