Lycorma delicatula (spotted lanternfly): 142329314
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Entry
142329314 CDS
T11193
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like smid
KO
K14571
ribosome biogenesis ATPase
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142329314 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lda03009
]
142329314 (smid)
Ribosome biogenesis [BR:
lda03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
142329314 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_33
AAA_14
RNA_helicase
TIP49
AAA_28
Mg_chelatase
AAA_2
NPHP3_N
nSTAND3
AAA_17
Rad17
IstB_IS21
ABC_tran
Parvo_NS1
TsaE
AAA_7
AAA_3
AAA_18
NACHT
Vps4_C
YL1
Sigma54_activ_2
ATPase
SLFN-g3_helicase
AAA_11
Motif
Other DBs
NCBI-GeneID:
142329314
NCBI-ProteinID:
XP_075229913
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All DBs
Position
8:32575156..32627470
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AA seq
1037 aa
AA seq
DB search
MGKISLDDNSRSKTATIKVGKKIAKNKELKIHNFKTKKLKNMSNYFADPLIIPRVEDYLE
ENKDKIHVDVDEMVDDLRKLYREYGRKKRGPFKSVVEKAFATVLKRHGQNNIGSNLSDDT
EGEDEDFEEDEDEEEDEDISGLEDEDDDDEEEEEEEEEEDDEEMYEDIPERPNRVKRPMG
VNMFENEKVTQRNGSQELINISSDESDKSDKEASPKKGSPNKIIAKIKSTAAQKVPVIAT
RHPSSPKYGSQTASSKFTANNNINMGSYQNQLDSSLTKRKQLSASVTKFQPNPANTVKHT
LEFPIKTRTCVKFSDVAGCSKVLEDITQLLIHLRHPEVYNHLGVIPPRGFLLHGPPGTGK
TLIARAIAGEIKLPLIQVAAPELIRGVSGGSEERIRLLFEQAVSIAPCILFLDEVDAVTP
RRDNAQREMERRIVAQLLVSMDELLTTPGGNKVLIIGATNRPDSIDPALRRAGRFDREVC
LGIPDRTARKEILQLLSSKLRVSESVSFDDIAASTPGYVGADLKSLLTEAAMAAVQRLFG
EKRDDKSDLANNRVDQNRIETNEIDITLSTKDEEMSVVAHKDNSNSDSTLEKQIPVIDAV
VEPDMGEPEAKKRKTETYSVLENGEEIQILPDEGKEKDENKNNTSLDESVAIESINEVNN
KNADEIILNNESKIDDTDVINVEDEECDVKNEEKKKVIEVIKVSSLLHWSQPLTSEQLKS
LVIEECDFKVALKFIQPSAKREGFATVPDVSWDDIGSLKDIRHELQMTILAPVRYPAAFS
TLGLSASSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESERAVRQCFM
RARNSQPCVIFFDELDALCPKRSESGDGGSSMRVVNQLLTEMDGVEGRNGVFIMAASNRP
DIIDPAVLRPGRLDKILFVGLPSPSDRVDILKALTKNGTKPLIHEDVNLETIGHSELCHG
YTGADLSSLVREAGMESLKEYMANNGAGPVCVAARHFMAALQKIRPSVSEKDQEHYEKLR
SQYAVIPQNVNNMEVSE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatctcattagatgataattctagatctaaaactgcgacgataaaagtaggc
aaaaagattgccaaaaataaagaactgaagatacataatttcaagacgaaaaagttaaag
aatatgtctaattattttgcagatccgttgattataccacgtgtagaggattatttggaa
gaaaacaaagataaaatacatgtagatgtggatgaaatggttgatgatttaagaaaatta
tatagagaatatggtagaaagaaaagaggtccttttaaatctgttgttgaaaaagcattt
gctactgttctcaaaaggcatggacagaataatattggttctaacttgtcagatgataca
gagggtgaggatgaagattttgaagaagatgaagatgaggaagaagatgaagatatttct
ggtttagaagatgaggatgatgatgatgaagaagaagaagaagaagaagaggaagaagat
gatgaagaaatgtatgaagatataccggagcgaccgaatcgagttaaacgtcctatgggt
gtaaatatgtttgaaaatgaaaaggtcacacagagaaatggatctcaagaattaattaac
attagtagtgatgaaagtgataaaagtgataaagaagcatctccaaaaaaggggtcgcct
aacaaaattattgcaaagattaaatcaactgcagcacagaaagttcctgttattgctaca
agacatccttcttcaccaaagtatggttctcaaacggctagtagtaaatttactgctaat
aataacataaatatgggttcataccaaaatcaactcgattcatcactgactaaaagaaaa
cagttatctgcatcagtaactaaatttcagccaaatcctgctaatactgttaaacacact
ttagagtttccaattaaaacccgaacttgtgtgaaattcagtgatgttgcaggttgctca
aaagttcttgaggacataacacagttattaattcatcttcgacatcctgaagtttataac
catctgggagttattccacctcgtggtttcttattacatggtccaccaggaacagggaaa
acacttatagcaagagctattgctggtgaaataaagttacctcttattcaagttgctgca
ccagaattaattagaggtgtatccggtggttcagaagaaagaatcagattattatttgaa
caggctgtttcaatagcaccatgcatattgtttcttgatgaagtagatgcagtaacacct
cgaagagataatgctcaacgtgaaatggaacggcgtatagttgcacagttacttgtctca
atggatgagcttttaactacaccaggaggaaataaagtattaattattggtgcaacaaat
cgtcctgattcaattgatcctgcattacgtcgtgctggacgatttgatagagaagtttgt
cttggtataccagacagaacagctagaaaagaaattttacagcttttatcttcaaaactt
cgtgtatcagagtcagtttcttttgatgatattgctgctagcacacctggttatgttggt
gctgatttaaaatctctgcttactgaagcagctatggctgctgttcaaagattgtttggt
gaaaaaagagatgacaaaagtgatttagcaaataacagggtagatcaaaataggatagaa
acaaatgaaattgatatcacattaagtacaaaagatgaagaaatgagtgttgtagcacat
aaagataatagtaacagtgatagtacattagaaaaacagataccagttatagatgcagtt
gttgaaccagatatgggtgaaccagaagccaaaaaaagaaagacagaaacttatagtgtt
cttgaaaatggtgaagagatacaaattttacctgatgaaggcaaagaaaaagatgaaaat
aagaataatacaagtttagatgagagtgttgcaattgagagtattaatgaagtaaataat
aaaaatgctgatgagattatcttgaataatgagagtaaaattgatgatactgatgtcata
aatgtagaagatgaagagtgtgatgttaaaaatgaggaaaaaaaaaaagttattgaggtt
attaaagtcagttcattacttcattggagtcagccgttaacgtctgaacagttaaaatcc
ttggttattgaagaatgtgattttaaagttgctttaaaatttattcaaccttcggctaaa
agagaaggatttgctactgttcctgatgtttcatgggatgatattggatcacttaaggat
attagacatgaactccaaatgacaattttggctccagttcgatatcctgctgcgttttca
acattaggtcttagcgcatcaagtggtgtcttactttgtggtccaccaggttgcgggaag
acattacttgccaaagcgattgccaatgaagccggtatcaattttatttctgtaaaggga
cctgaattattaaatatgtatgtaggggaaagtgaacgtgcagttagacagtgtttcatg
cgagcaagaaattcccagccatgtgtaatattttttgatgagttagatgcactttgtcct
aagagatcagaatctggtgatggtggttccagtatgcgtgtagtaaaccagctgttaact
gaaatggatggtgttgaaggacgcaacggtgtatttattatggctgcctcaaatcgacca
gatataattgatcctgctgtattgagaccaggtcgtctagataaaatattatttgttgga
ttaccttcaccttctgatcgtgttgatattcttaaagcgttaactaagaatggaaccaaa
ccgttaatacacgaagatgttaacctagagactatcggtcatagtgaattgtgtcatggt
tatactggagctgatctctcttcactggtacgtgaagctggtatggaatcattgaaagag
tatatggcaaacaatggtgcaggacctgtttgtgttgctgctagacattttatggctgct
ctgcagaaaataaggccatctgtatcagaaaaggaccaagaacattatgaaaaactaaga
tcacagtatgctgtaatcccacaaaatgtaaataatatggaagtgtcagagtaa
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