Lycorma delicatula (spotted lanternfly): 142329732
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Entry
142329732 CDS
T11193
Name
(RefSeq) superkiller complex protein 2-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142329732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lda03019
]
142329732
Enzymes [BR:
lda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142329732
Messenger RNA biogenesis [BR:
lda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142329732
mRNA degradation factors
3'-5' decay
Ski complex
142329732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
Ski2_N
ATPase_2
KOW
MTR4-like_stalk
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
142329732
NCBI-ProteinID:
XP_075230580
LinkDB
All DBs
Position
9:complement(84969571..85040877)
Genome browser
AA seq
1226 aa
AA seq
DB search
MPQNTMCEKENDLKLQLPFGPPPVCPDALKQLEQYLLDIEQLPTYNYEKSHKFWSREPQL
STLLNFSPSLFATTLKPERDPKTGELLRFKEVFVTDFADVDEFNDKSCSNPANNEISIDF
ENLMSTPPGMKCGYDFNVVDTQQFPVLPAKKNVINLTNILQVEDSLGLTIQEKKKDVKKE
EIKETKPKPVAKVVNIDTEEQEEVIPVESSIPVLKISETPSLKVLEKADWAEELAVKPVL
DFKERVPKMAYKWDFELDPFQQLAIVKLEEDGNVFVAAHTSAGKTVVAEYAIALSLQRCT
RAIYTSPIKALSNQKYRDFRSNFEITKKMGEVGLITGDIQVNPKAPCLIMTTEILRSMLY
NKSEVVQDLEFVIFDEVHYINDPDRGHVWEEVMMLLQSHVKIVMLSATVPNAIEFANWVG
QIKKKKVYLICTQNRPVPLHFYLYTGTHDGNTDNMFLVRKAEGLWDHKEYHKAEMSRLCL
EKPTGGRGGRGGRGGGKGRGGTSNDGGINTQAQERKLWISFVNYLKKKDKLPVVTFVLSR
GRCDYTAHMLVDCINLVSHTESASITNFFKKSIIHLKAEDQGLPQVSNMGKLLSKGIGIH
HSGILPILKEIVEMLFQQGQVKLLLATETFAMGVNMPTKTVVFESIRKYDGNDWRNLLPA
EFIQMAGRAGRRGIDKTGTVAIMCKNRVPPERDLRNMMFNKPSKLESQFKMTYATILKNL
LRTNEATNPVERMMSSSFKEFSEQSKHGVYLEKLNKVKWAYESLMEEKSQENSGKHRGYE
SLEDFYEDALDFISLRKEVQEFQLGEMKIAKDLVPGRVIVVAVGPFSNRLGLILSTDRNK
KMFQVLILVNQNDGHYDPKCDHKSEKCICHDEIYFRMRDIVRGSERFVPDTTNYMVIKIE
PQNIMEITTMTDNMKLNYDAVLNDWRYRQCNKNHTPNDETFHALRGLLEKSSYFAVNHIV
NIYKKLEPPSLTYKTSYDKLQSLRCKLRVYSFRSIPNCDNLFTLVYKYKKLEGLRESYNK
KISEFSMSEDFKSKLEILKELKYVDSSNSVELKGRGAIRMTTNEIMVTELIFRNTLSDFE
PAEIAALLSCLVFQAKTNVKIEEVLTPRLLNGRDLIKEIHEELQKIENKHMNNMTGESAY
EFVDLNFGLVQVVYEWACDKVFSEIMKLTDVQEGIIVRCIQQLNEVLRCVKEVAQKVGDC
TLESKMDKASNAIKRDIVFAASLYLQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaacacaatgtgtgaaaaagaaaacgatttaaaactacagctgccctttgga
ccacctcctgtgtgtcctgatgctttgaagcagttggaacagtatttattggatatagaa
caacttcctacgtacaactatgagaaatctcataaattttggtcaagagaaccgcagcta
tcaacacttttaaatttttctccttcgttgtttgctacaaccttaaaacctgaacgtgac
ccaaaaacaggggaattgctaagattcaaagaggtatttgtgactgattttgctgatgtt
gacgagtttaatgataaaagttgtagtaatcctgctaataatgaaatatcaattgatttt
gaaaatttgatgagcactcctcctggtatgaagtgtggatatgactttaatgtagtagat
acacagcagttccctgtacttccggctaagaaaaatgttattaatttgacaaacatttta
caagtagaagattcactgggtttaactatacaagagaagaaaaaagatgttaagaaagaa
gaaataaaagaaactaaaccaaagcctgttgctaaagttgttaacattgatactgaagaa
caggaagaagttattccagtagaatctagtattccagttctgaagatttctgaaacgcca
agtttaaaagttttagagaaagctgactgggctgaagaattggctgtcaagccggttctg
gatttcaaagaaagagttcctaagatggcttataagtgggattttgaattagatccattt
caacagttggctatagtaaaattagaagaagatggtaatgtatttgttgcagctcatact
tctgctggtaaaactgttgttgcagaatacgctattgctctatctctacagcgatgtact
agagcgatttacacttcaccgattaaagccctttctaatcagaaatatcgtgattttaga
agtaattttgagattacaaagaaaatgggtgaagtaggtttaatcactggtgatattcaa
gtgaatcctaaggctccttgtttaattatgacaacagaaatattgcgttctatgttgtat
aataagagtgaagttgtacaggacttggagtttgtaatattcgatgaagtgcattatata
aatgatcctgatagagggcatgtatgggaagaagttatgatgttgttacaaagtcacgta
aaaattgttatgttaagtgctactgttccaaatgcgattgaatttgcaaattgggttggg
cagattaaaaagaaaaaagtctatcttatttgtactcaaaatagacctgttccactacat
ttttatctgtatactggtactcatgatggcaacactgataacatgtttttagtaagaaaa
gctgaaggattgtgggatcacaaagagtatcacaaagcagagatgtccagattatgtctg
gagaaacccactggtggtcgtgggggaaggggaggaagaggtggtggtaaaggaagagga
ggaaccagtaatgatggtggtattaatactcaagctcaagagagaaaattgtggatatca
tttgtaaattatttaaagaaaaaagataaattgccagttgttacatttgttttatctcgt
ggtcgatgtgattatactgctcacatgctagtagattgtatcaatctggtcagtcatact
gaatctgcgagtattacaaatttttttaaaaaaagtattattcacttgaaagcagaagat
cagggattacctcaggtgtctaatatgggcaagctgttatcaaaaggaattggtatacac
cacagtgggattctaccaattttgaaagaaattgttgaaatgttatttcaacagggccaa
gttaaactacttcttgccactgaaacatttgcaatgggggtaaacatgcccacgaagact
gttgtgtttgaatctataagaaagtatgatggtaatgattggcggaatttgctgcctgca
gagttcatccaaatggcaggtcgtgctggacgtcgtgggattgataaaactggcactgta
gccattatgtgtaaaaatagggtacctcctgaaagagatctaaggaatatgatgtttaat
aaaccatcaaaattagaatctcagttcaagatgacatatgctacaattctgaaaaacttg
ttaagaacaaatgaagctacaaatcctgtagaaaggatgatgtccagtagctttaaagaa
ttttcagaacaaagtaaacatggtgtgtacttagagaaattaaataaagtaaaatgggca
tatgaatccttgatggaggaaaagtcgcaggaaaattcaggcaaacaccgtggatatgaa
tcattagaagatttctatgaagatgctctggattttattagtcttaggaaggaggttcaa
gaattccagttgggcgaaatgaagattgctaaagatttggtgcctggacgtgttattgtt
gttgcagttggaccatttagtaatagattaggacttattttatcaactgaccgtaacaaa
aagatgtttcaagtattaattttggtcaaccaaaacgatggacattatgatcctaaatgt
gatcataaatcagaaaaatgcatttgtcatgatgaaatatattttcgaatgcgtgatata
gttagaggctctgaaagatttgttccggatactacaaactatatggtaattaaaattgaa
ccacagaacattatggaaattacaactatgactgacaatatgaaattaaattatgatgct
gttttgaatgattggcgatacagacagtgtaataaaaatcatactccaaatgatgaaaca
tttcatgctttgcggggtcttcttgaaaaaagttcatattttgccgtaaaccacattgtt
aatatatacaaaaaacttgagcctccaagtctgacatataaaacttcatatgataaatta
caaagtttaagatgtaagttacgtgtatatagttttcgttctatccctaactgtgataat
ttgtttacattggtatataaatataaaaagttagaaggattaagagagtcatataataaa
aagataagtgaattttctatgagtgaagattttaaaagtaaactagaaattctaaaggag
ttgaaatatgtagacagttcaaatagcgttgaacttaaaggtagaggtgccattaggatg
acaacaaatgaaattatggttactgaactgatctttcgtaacacactgtctgactttgag
cctgcagaaattgcagctttactttcctgtcttgtatttcaagcaaaaactaatgtaaaa
attgaagaagttcttacacccaggcttttgaatggcagggatttgattaaggaaattcat
gaagaacttcagaagattgagaataaacatatgaacaacatgactggtgaatcagcttat
gaatttgttgatctgaattttggtttagttcaagttgtatatgaatgggcatgtgataag
gtattttctgagattatgaagttgacagatgttcaagaaggtattattgttcgctgtata
caacagttaaatgaagtattgcgttgtgtcaaggaagttgctcaaaaggttggagactgc
acacttgaaagcaagatggacaaggcttcaaatgccattaagagagatatagtttttgca
gctagtttatatcttcagtaa
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