Lycorma delicatula (spotted lanternfly): 142330126
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Entry
142330126 CDS
T11193
Symbol
Polr2A
Name
(RefSeq) RNA polymerase II subunit RpII215
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03020
RNA polymerase
lda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142330126 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
142330126 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lda03021
]
142330126 (Polr2A)
03400 DNA repair and recombination proteins [BR:
lda03400
]
142330126 (Polr2A)
Enzymes [BR:
lda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
142330126 (Polr2A)
Transcription machinery [BR:
lda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
142330126 (Polr2A)
DNA repair and recombination proteins [BR:
lda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
142330126 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
142330126
NCBI-ProteinID:
XP_075231324
LinkDB
All DBs
Position
9:complement(66260902..66313066)
Genome browser
AA seq
1897 aa
AA seq
DB search
MAMSDSKAPVRTVKRVQFGILSPDEIRRMSVTEGGIRFPETMEAGRPKIGGLMDPRQGVV
DRLSRCQTCAGNMSECTGHFGHIDLAKPVFHVGFVTKTIKILRCVCFYCSKLLVSPSHPK
IKEIVMKTKGQPRRRLTFVYDLCKGKNICEGGDEMDLNKDNTEDQNAQQPARKAGHGGCG
RYQPNLRRAGLDVTAEWKYVNEDSQEKKILLSAERVWEILKHITDEECFILGMDPKYARP
DWMIVTVLPVPPLAVRPAVVMHGSARNQDDLTHKLSDIIKCNNELIRNEQAGAATHVIAE
NIKMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSART
VITPDPNLRIDQVGVPRSIAQNMTFPEIVTPFNIHLMKELVSRGNSQYPGAKYIIRDNGE
RIDLRFHPRPSDLHLQFGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMN
LSCTSPYNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAV
RKMTKRDVFLEKEQMMNLLMHLPIWDGKMPQPCILKPKPLWTGKQLFSLIIPGNVNMIRT
HSTHPDDEDSGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVC
GRFYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMDL
EPTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVI
ACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGRE
GLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQK
IASIDLSNAKFENKYKFDVSNERHLRKVFSEDVLREIVGSGEVISELEKEWEQLSRDREA
LRQIFPSGESKVVLPCNLKRMIWNVQKIFHINKRVPTDLSPLKVIQGVKELLQKCVIVAG
EDQLSKQANENATLLFQCLVRSTLCTKLVSEKFRLSSEAFEWLTGEIENRFQQAQCQPGE
MVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTG
AAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPT
RISPWLLRIELDRKRMTDKKLTMEQISEKVNAGFGDDLNCIFNDDNAEKLVLRIRIMNSD
ENKLQEEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIVVTDS
GEFKAIADWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNTV
LQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASH
AEVDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKQGMEISLSMGAGMMGGTGMFFGSA
ATPSMSPPMTPWQQGTTPMYGNAWSPAEGSGMTPGGPNFSPSGSSDASGLSPGYSPAWSP
QPGSPGSPGPSSPFIPSSVGGMSPSYSPSSNAYAPASPSLTPTSPTYSPTSPSYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPTSPSYSPTSPSY
SPSSPRYSPASPSYSPTSPKYSPTSPSYSPTSPSFVSSPQYTPTSPQYSPTSPTYSPTSP
SYSPTSPSYSPSSPQHTPSTRYSPTSPKYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPT
SPNYSPTSPTYSPTVPGYSPTSPTYSPTSPSYDPADD
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtccgattccaaagcaccggttcgcacggtgaagcgagtgcaatttggaatt
ttatcgcccgatgaaatccgtcgtatgtcggttacggaaggtggcattcgatttccagaa
actatggaagctggccgtcctaaaattggaggtcttatggatcctcgtcaaggggttgtt
gataggctatcacgttgtcagacatgtgctggaaatatgtcagaatgtactggtcatttt
ggtcatatagatcttgctaaaccggtctttcatgttggttttgttactaaaactattaaa
atacttaggtgtgtatgtttctactgttcaaaactgcttgtcagtcctagtcatccaaag
ataaaagaaattgttatgaagactaaaggacaaccacgtagacgtttaacatttgtatat
gatttatgcaaaggcaaaaatatttgtgaaggtggagatgaaatggacttgaataaagac
aatactgaagatcaaaatgctcagcagccggctaggaaagctggccatggtggttgtggt
agatatcagccaaatttaagacgtgcaggtttggatgtaactgctgaatggaaatatgtc
aatgaagattctcaagaaaagaaaattctgttgtcagctgagcgagtttgggaaatatta
aaacatattacagatgaagagtgttttatattgggtatggatcctaaatatgctagacca
gattggatgatagtaactgtattacctgtaccacctttagctgtacgtccagctgttgtt
atgcatggttctgctaggaatcaggatgatttgactcataagttatctgatattataaag
tgtaacaatgagttaatacgtaatgaacaagctggtgctgccacacatgttatagcagaa
aatattaaaatgttacagtttcatgtggcaacacttgttgataatgacatgccaggatta
ccaagagctatgcagaaatctggtaaaccattaaaagctattaaggcaaggttaaaaggt
aaagaaggtaggattcgaggtaatttgatgggtaaacgagtcgatttctcagcaagaact
gtaatcacaccagatcctaatttacgtattgatcaagtcggtgtaccacgttcaattgca
cagaatatgacattccctgaaatagttacaccatttaatatacatcttatgaaggagtta
gtaagtcgtggtaattcacagtatcctggtgcaaaatatattattagagataatggtgaa
cgaattgacttacgtttccatcctagaccttctgatttacatttacagtttggttataag
gttgaaaggcacattagggatggtgatcttgtaattttcaatcgacaacctacattgcac
aaaatgtctatgatgggccatagagttaaagtattaccttggtctacattccgtatgaat
ttaagttgcacatctccatataatgctgattttgatggggatgaaatgaatttacatgta
ccacagtcgatggaaactcgtgcagaaattgaaaatatccatattacgcctcggcagatt
attacaccgcaagctaataaacccgttatgggtattgtgcaggatacattaactgctgtt
agaaaaatgaccaaacgtgatgtatttcttgaaaaggaacaaatgatgaatttattgatg
catcttcctatttgggatggtaaaatgccacaaccatgtatattgaaacctaaaccttta
tggacaggtaaacagttattttcgttaataatacccggaaatgtaaatatgatacgtaca
cattcaacacatccagatgatgaagacagtggcccatacaaatggatttcaccaggagat
actaaggtaatggtagaacatggtgaattagttatgggaattttatgtaagaagacactt
ggtacttcagctggatcattgcttcatatctgtatgttggaattgggacatgaagtatgt
ggaagattttatggaaacattcaaactgttgttaataattggctgttgttggaaggtcac
tctattggtattggtgacactattgctgatcctcagacgtacttggaaatccagaaagca
attaaaaaagccaaagaagacgtgatagaggttatacaaaaagcacataatatggatctt
gaacctacacctggtaacacattgaggcagactttcgagaatcaggtaaacagaatttta
aacgatgctcgagacaagacaggaggatcagccaaaaaatcattaacagaatacaataat
ttaaaggctatggtcgtttcaggttctaaaggatcaaacattaatatctcacaggttatt
gcttgtgtagggcagcaaaacgttgaaggtaaacgaattccgtttggtttccgtaaaaga
acattacctcatttcattaaagatgattatggtcctgagtctagaggttttgtagaaaac
tcataccttgccggtcttactccgtcagaatttttctttcatgctatgggaggtcgtgaa
ggtctcattgatactgctgtaaaaacagctgaaacaggatatatccagcgtcgtttgata
aaggctatggagtctgtcatggtacattatgatggtacagtacgtaattctgtgggacag
ttgattcagttacgttacggagaggatggactgtgcggagaaactgtagagtttcaaaaa
attgcctccattgatctttcaaatgctaaatttgaaaacaaatacaaatttgatgtctct
aatgaaagacatttaaggaaagtattctcagaagatgtgctgagggaaattgttggaagt
ggagaagttatatcagaattggaaaaagaatgggaacagctttcaagagatcgtgaagct
ttacgacaaattttccctagtggtgaatcaaaagtcgtattaccttgtaatttaaaacgt
atgatttggaatgtacaaaaaatcttccacattaataaacgtgtaccaactgatcttagt
ccattaaaagttatacaaggtgtaaaggaactattacagaaatgtgtcattgtagctgga
gaagatcagttaagtaaacaagctaatgaaaacgcaactttactcttccagtgccttgtc
cgttcaacattatgtacaaaattggtttcagaaaaattccgtctttcttcagaagcattt
gagtggcttactggtgaaattgagaacagattccaacaagctcagtgtcaacctggtgaa
atggtaggtgctcttgctgctcagagtctaggtgaacctgctacacagatgacactgaac
actttccactttgctggtgtgtcgtcaaagaatgtaacacttggtgtgcctcgattaaag
gaaattattaacatcagtaaaaaaccaaaagctccttctttaacagtattcttaactggt
gcagctgcaagagatgctgaaaaagctaagaacgtattatgtcgtttggaacatacaacg
ttaagaaaggttacagcaaataccgctatttattatgatcctgatccccagaatacagtt
atacctgaagatcaagaatttgttaatgtttactatgaaatgcctgactttgatccaacc
agaatatcaccatggctgttgcgaattgaattggacaggaaaagaatgactgataagaag
ttaactatggaacagatatctgaaaaggttaatgcaggttttggtgacgatctaaattgt
atatttaatgacgacaatgctgagaaattagttctcaggataagaataatgaacagcgat
gaaaataaattacaagaagaggaagaaacagttgataaaatggaagatgatatgttctta
aggtgtattgaagcaaatatgttgtcggacatgacattacaaggaatcgaagcaatcagt
aaggtgtacatgcatcttccacagactgattcaaagaagagaatcgttgttacagatagt
ggtgaatttaaagctattgctgattggttacttgagactgatggtactagtttaatgaaa
gtattaagtgaaagagatgtagatccagttaggactttctcaaacgacatctgtgaaatt
ttccaggtacttggaatagaggctgttcgtaaatccgttgaaaaggaaatgaatactgta
ttgcaattttatggtctttatgtaaactaccgacacttggctttattgtgtgatgttatg
acagcaaaaggtcacttgatggccattactcgtcacggtattaatagacaagatactggt
gctttgatgagatgttcatttgaagaaactgttgatgttttgatggatgctgcatctcat
gctgaagtagatccaatgagaggtgtgtctgagaacattataatgggacagttacctcgc
atgggtacaggttgtttcgatttattactggatgctgaaaaatgtaagcaaggtatggaa
atatcgcttagtatgggagcaggaatgatgggaggaacaggaatgttctttggtagtgct
gccacaccttccatgagtccaccaatgactccatggcaacagggaactacaccaatgtat
ggaaatgcatggtcaccagctgaagggagtggaatgacacctgggggaccaaacttttca
ccatctgggtcgagcgatgccagtggattatctcctggatacagtccagcatggagtcct
cagccgggcagtcctggttcacctggtccatcatcaccatttattccatcatctgttgga
ggaatgtcaccatcatactccccatcaagcaatgcttatgcaccggcatctccgagtctt
acacccacttcaccaacatactcaccgacttcaccttcttattctccaacttcaccaaat
tattctccaacatctccgtcttattcccctacttctccatcatattcacctacttctcca
tcttactcccctacttctccttcttacagtcccacttctccatcatactcaccaacatcc
ccatcatattctcccacatcaccgtcctattcacccacatctccatcgtattctcccaca
tctccatcttactcgcccacttctccatcatacagtcctacttctccatcgtattcacca
acatctccttcgtactctccaacttccccatcatacagtccaacatctccatcttactca
ccaagttctccaaattacacacctacatctccatcttattcgccgacatctccatcttat
tcgccttcatctcctcgttattccccagcaagtccatcatattctcctacttctccaaaa
tattctcccacttctccctcatattcaccaacttcccccagttttgtttcaagtccacaa
tacacaccgacttctccacagtattccccaacttccccaacgtattcaccaacatcacca
tcttattcaccaacttccccttcatattcaccaagctcaccacaacatacaccatcaacg
cgttattctccaacatcaccaaaatattcccctacgtcgccaacatattctccaacaagt
cctcaatattcaccttccagttcaaaatattctcctacatctccgacttatacaccaacc
agtccaaactacagccctacatctccaacttattctccgactgtacctggctattctccg
acttctccaacttattctccaacttctccatcatatgatcctgctgatgattaa
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integrated database retrieval system
