Lycorma delicatula (spotted lanternfly): 142331237
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Entry
142331237 CDS
T11193
Symbol
Sym
Name
(RefSeq) symplekin scaffold protein
KO
K06100
symplekin
Organism
lda Lycorma delicatula (spotted lanternfly)
Pathway
lda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142331237 (Sym)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lda03021
]
142331237 (Sym)
03019 Messenger RNA biogenesis [BR:
lda03019
]
142331237 (Sym)
Transcription machinery [BR:
lda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142331237 (Sym)
Messenger RNA biogenesis [BR:
lda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142331237 (Sym)
U7-dependent histone pre-mRNA processing factors
142331237 (Sym)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
HEAT_2
Cnd1
Adaptin_N
PDS5
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
142331237
NCBI-ProteinID:
XP_075233103
LinkDB
All DBs
Position
10:complement(98295336..98359199)
Genome browser
AA seq
1194 aa
AA seq
DB search
MSLRGDPSKRRSAAAQFFMEDDVVQDNNEGEEETKSSHQKVVEWINEASLSLDVNRKTEL
LHLTQEIIVHKEPDLLDNFLHEVIAFQTDRNGEVRKFVVGFIEEACKKDWDMLSKVIPNL
QLLLQDSSPQVQKRVIQACNAIYKGTLGWLSKAKVVTEEMQGVWTILSSMKHGIINMVDS
DNDGIRTFVVKFLETVVLCQTYPESDSLQRPNDFTLEDIPLGLKIARRRKLEEEAMTVFD
LMVKFHGSPHISSVNLMTCMGSLTLIAKMRPNFMGKVIAALETLHMNLPPTLSKSQVSSV
RKHLKMQLLNLLRHPSAVTYLTNITTLLTDLGATYHEVMKAYPKVEEVKRKSKRGLISSS
SSSSSSPADTSKKPRLDEQRDSGNSATHTGSDSDPLSSTTASMPPQHVVTETAIDITEQY
IVQRLTPDLAADLVITAMSKLPDTMPSVFSATYTPIAAAGTQGQIRHVARLLATQLNAVG
LGPGAAVASKRKMVEQGDDDDDDDYDDNEERQIGTLVTAGPVVDKSSINTVAALPGPLQP
SNKPMKLKSLKLSKITRPLSEEIRDSMSVSAVMRILSSEKSAIVGGVLSIRSKMIATMAT
TFSVTVRRAVLDYILTDIRNNLSLGLAWLYEEYSYMQGFKRLPAALTPDIKKKDKNYNSL
LLSFIQTIMNRSDIKEKDILLMRLFLEAPIITDEATDLLKELCCHDHYGLNILQELVIRR
PPRQLLYLNAMLTHTAHENPEVRDTAIKCVVSLYDRGELRSIIEEYAVLYLSFLRLPQPP
DVLFGEERGRPNKGDGIWSEEAAKACLYLYLILLPINQNLIHELARVYVQTVADVKRIIL
RLVESPVRGMGMDSPQLLSLVEECPKGAETLVTRVIHILTDKVPPSAELVARVRELYHTR
VSDVRFLIPVLNGLTKKEIIAALPKLMKLNPVVVKEVFNRLLGTHTDSHHSSPITPAELL
IALHTIDPSKCELKTVMKATSLCFNEKQAYTQEVLAVVMQNLMEITPLPTLLMRTVIQSL
SLYPRLIGFVINILQRLILKQVWRQKKVWEGFIKCCQRTKPQSFQVLLQLPAAQLQDVFE
YSPDMKQPLLEHVMNFTDNQRAHIPQAVMDILMGPDQPIYPQYTVKSEPMSPTELTIDIK
EESEVNAGTENKAPTAVPQQPQTQPPPPPLQPLPSQPQPQPQSQFGEPAPPGLE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacgtggtgatccaagtaagcgccgcagtgcagctgcacagttttttatggaa
gatgatgttgttcaggacaacaatgaaggagaggaagaaactaagtcctctcatcaaaag
gttgttgaatggattaatgaagcttcactttcattagatgttaataggaagactgaattg
ttacatttaactcaagaaataatagtacataaagaaccagatttacttgataatttttta
catgaggttattgcctttcagactgatagaaatggagaagtcagaaaatttgttgttggt
ttcattgaagaggcctgcaagaaggactgggatatgctttcaaaagttatacctaatctt
cagttattgcttcaagattcaagcccccaagtccagaagagggtcatacaggcatgtaat
gccatatataaaggtacactaggttggctttcaaaagccaaagtagttactgaagaaatg
caaggcgtatggactatattgtcttcaatgaaacatggcattattaatatggtggatagt
gacaatgatggaatcagaacatttgttgtaaagttcttggaaactgttgttttatgtcaa
acatatcctgagtcagatagtttacagcgaccaaatgatttcacattggaggatatccct
cttggattgaaaattgctcgaagaagaaaacttgaggaagaagccatgacggtattcgat
ttgatggtgaaatttcatggatcacctcacatatccagtgttaatttaatgacttgtatg
ggttcattgacgttaattgcaaaaatgagaccaaatttcatgggaaaagttattgctgct
ctagaaacacttcacatgaatcttcctccaacactatctaagtcgcaagtgagttctgtc
agaaagcacctaaaaatgcagttgctgaatttattaagacatccatctgccgttacgtat
ctgacaaatattactacgcttttaacagatcttggtgctacatatcatgaggtaatgaaa
gcatatcctaaagttgaagaagttaaacgcaaatctaaacgtggtttaatatcgtcatca
tcatcatcctcatcatcacctgctgatacatctaaaaaaccaagacttgatgaacagaga
gatagtggaaattctgctacacacacaggatctgattctgatcctttatcatctacaaca
gcctcaatgccccctcaacatgttgttactgagacagcaattgatattactgagcaatat
attgtacagcgtttaactccagatttggccgcagatttggttataacagctatgtcaaag
ttaccagacacaatgccgtctgtattcagtgcaacatatactccaatagcagcagctggt
actcagggacaaattcgccatgtggctagattattggcaactcagttgaatgcagttggc
ttgggacctggcgctgcagttgcttctaaacgaaaaatggtggagcagggtgatgatgac
gatgatgatgattatgatgataatgaggaacgccagattggtacattagtaacagcaggg
cctgtcgttgataaaagttcaattaacacagtggctgcattacctggaccactacagcct
tcaaataaacctatgaaattaaaatcattgaaattatcaaaaattacaagacctctttca
gaagaaatccgtgactcaatgtcagtttctgctgttatgaggatattaagttcagaaaaa
agtgcaattgttggtggtgtgttaagcatacgtagtaaaatgatagctacaatggcaact
acatttagtgtaactgtgagaagagctgttttagattatatattgactgatattcgtaat
aatttatcattgggtctcgcttggctatatgaagaatacagttacatgcaaggttttaaa
cgtttaccagctgcacttacacctgacataaagaagaaagataaaaattacaactcacta
ctgttatctttcattcagactattatgaatagatctgatattaaagagaaagatatttta
ttaatgagattatttttagaagcaccaattataactgatgaagctacagatttattaaag
gaattgtgctgtcatgatcactatggcctgaatatattacaagaacttgtgataaggcga
cctccaagacaattattgtatcttaacgcgatgttgacacatactgctcatgagaatcct
gaggtgcgtgatactgcaataaagtgtgtcgtatcattgtatgatagaggagagttgagg
agcatcatagaagaatatgctgttttgtatcttagttttctgcgacttccacaaccacct
gatgttttgtttggagaagagcgaggtcgtccaaataaaggggatggcatatggtctgag
gaagcagcaaaagcttgcttgtatttgtacttgatattactacctattaatcagaacctc
attcatgagcttgctagggtgtatgtacagacagtagctgatgtcaaaaggattatactg
agattggttgaaagtcctgttagaggcatggggatggattcaccacaacttctatcattg
gtcgaagaatgtcctaaaggagctgaaactttggttaccagagtaattcatatattaacc
gataaagttcctccaagtgcagaacttgttgctagagtacgtgagctgtatcatactcgt
gtttctgatgtacgtttcttgataccagtacttaatggtttgacaaagaaggagattatt
gcagcactccctaaactgatgaaactgaatccagttgttgtaaaagaggtattcaatagg
ttactaggaacacatacggattctcaccattcatctcctataacaccagcggaactgtta
atagctttacataccatcgatccttcaaaatgtgaacttaaaaccgtcatgaaagctacg
tcattatgtttcaatgaaaaacaggcatacacacaagaagtattagctgtagtaatgcag
aacttaatggagattacaccactacctactttattgatgaggactgttatacagtcatta
tcattgtaccctcgtctcatcggtttcgtcattaatatattacagaggcttattttaaaa
caggtttggcgtcaaaaaaaggtatgggaagggtttattaaatgttgtcagcgaacaaag
cctcagagtttccaggtattgctgcagcttccagcagctcagttacaagatgtctttgag
tactcaccagatatgaaacaaccattactagagcatgttatgaactttactgacaaccag
agagcacatataccgcaggcagtgatggacattctaatgggtcctgatcaaccaatatat
ccacagtatacagtcaaatctgaaccaatgtctccgactgaacttactattgacattaaa
gaggaatctgaagtgaatgctggaacagaaaataaagctcctacagctgtaccacaacaa
ccacaaactcagccacctccacctccactacaaccactaccatcacaaccacagccacaa
cctcaatcacaattcggcgaaccagctccacctggtcttgagtga
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