Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb0465
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Entry
Ldb0465 CDS
T00364
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Pathway
ldb03420
Nucleotide excision repair
ldb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ldb0465 (pcrA)
03430 Mismatch repair
Ldb0465 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb0465 (pcrA)
Enzymes [BR:
ldb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ldb0465 (pcrA)
DNA repair and recombination proteins [BR:
ldb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ldb0465 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Ldb0465 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
YMR265C_C
ResIII
Ead_Ea22
Motif
Other DBs
NCBI-ProteinID:
CAI97296
UniProt:
Q1GBF8
LinkDB
All DBs
Position
389971..392232
Genome browser
AA seq
753 aa
AA seq
DB search
MSEATILQGLNPQQVQAVKTTEGPLLVIAGAGSGKTSVLTRRIAYLVEEKRVAPWNILAI
TFTNKAAKEMKEREVKLLGDQAESIWMSTFHALCVRILRRDGHLIGYDRDFSIADPSEQV
TLVKRILRQLDLDPKQYLPRNILSQISNAKNCLQTPKQYEASAVGPFEKVVADVYKKYQA
SLERDQILDFDDLIMQTLTLFKASPDTLAYYQQKFRYLLVDEYQDTNEAQYELCRLLADG
YHNICVVGDADQSIYGWRGANMENILNFEHDYKNAQTVKLEQNYRSTGHILKAANSVIDH
NENRKAKKLWTDKGDGEKVHYYQAQSDRDETRFVLAKIKEEVDKKKRRYQDFAVLYRTNA
QSRGMEETLVEANVPYQIVGGHKFYDRKEIKDIMAYLKLVANPSDSMSFNRIINVPKRGI
GQATTTKLAAFADEMGGGIYEAMRNVELAPISSAAAKKLLAFSDQLTAAIAYAQDHTVSE
LTDKILEDFGYIKALKEEEAQGSLEAAARLENLQEFATVTKRFDDNYNEEENPDSSRLSD
FLAEVSLLSDQDDLEESDDRVTLMTLHAAKGLEFPVVFLIGMEENIFPLSRAIKDEDPNQ
LEEERRLAYVGITRAREELYLTSAYTRMMYGSKQYNSQSRFIGEIKDEDLDIVASTAPKS
STSFIDLDRLPFAKKSQAKAAQPAKIHRASKAAGAVGAEKKGWHPGDQVEHKSWGKGVVI
KVTGSGEDMELDIAFASKGNKRLLAAFAPIKKI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcaacgattttacaaggtttgaatccgcaacaggtccaggcagtcaagacg
actgaagggccccttttggtaatcgccggggccggcagtgggaagacctcagttttgacc
aggcggattgcctacttggtggaagaaaagcgggttgctccctggaacatcctggccatc
accttcaccaacaaggccgctaaagaaatgaaggaaagagaagtcaagctcctgggcgac
caggctgaaagcatctggatgtccaccttccacgccctctgcgtccgcatcctccgccgg
gacggccacttgatcggctatgaccgggacttctccatcgctgacccttcagagcaggtg
accctggtcaagcgcatcctccgccagctggacctggatcccaagcaatacctgccccgc
aacatcttgagccagatctccaatgccaagaactgcctgcagaccccgaagcagtatgag
gccagcgcggtcggtccttttgaaaaagttgtcgccgacgtctacaagaaataccaggcc
agcctggaaagagaccagatcctggactttgacgacttgatcatgcagacgctgaccctt
tttaaggccagtcctgataccctggcttactaccagcagaagttccgctatctgctggtt
gacgaataccaggacaccaacgaggcccagtacgagctctgccgcttgctggctgacggc
taccacaatatctgcgttgtcggggatgctgaccagtcaatctacggctggcggggagcc
aacatggaaaacatcctcaactttgagcatgactacaagaatgcccaaactgtcaaactg
gagcagaactaccggtcaaccggccacatcttgaaggcggccaactcggtcattgaccac
aatgaaaaccggaaggccaagaagctgtggactgacaagggcgacggggaaaaggtccac
tactaccaggcccagagcgaccgggacgaaacccgcttcgtccttgccaagatcaaggaa
gaagttgacaaaaagaagcgccgctaccaggactttgccgtcctttaccggaccaatgcc
cagtcccgggggatggaagaaactttggttgaagccaatgtcccttaccagatcgtcggc
gggcacaagttctacgaccgtaaggaaatcaaggacatcatggcctacctcaagctggtg
gccaaccccagcgattccatgagcttcaaccggatcatcaacgttccaaagcgagggatc
ggccaggctacgactactaaattggctgccttcgccgacgaaatggggggcgggatctac
gaagccatgcgcaatgtcgaattggctccgatttcttccgccgctgccaaaaagctcctg
gccttcagcgaccagctgactgccgccattgcttacgcccaagaccacacggtcagtgaa
ctgaccgacaagatcctggaagacttcggctacatcaaagccttgaaggaggaagaagcc
caaggatccctggaagctgctgcccgcctggaaaacctgcaggaattcgccacggttacc
aagcgctttgacgacaattacaatgaagaagaaaacccggacagcagccgcttgagtgac
tttttagcggaagtatccctcttaagcgaccaggatgacctggaagaaagcgatgaccgg
gtaactttgatgaccctgcacgcggctaagggtttggaattcccagtcgtcttcttgatc
gggatggaagaaaacatcttcccgctttcccgggccatcaaggacgaagacccgaaccag
ctggaagaagaacgtcgcctggcttacgtgggcattacccgggccagagaagagctttac
ctgacttcggcttacacccggatgatgtacggcagcaagcagtataattcccagtcccgc
tttatcggtgagatcaaggatgaggacctggacatcgtggcttcaactgccccgaagtcc
agcacttccttcatagacctggaccggctgccttttgctaaaaagtcccaagccaaagct
gctcagccggctaagatccaccgggccagcaaggcagccggggccgtcggcgctgaaaag
aagggctggcaccctggcgaccaggtagagcacaagagctggggcaagggcgtggtcatc
aaggtcaccggctctggcgaagacatggaactggacattgcttttgcaagcaagggcaac
aagcgcctgctggcggcttttgccccgatcaagaaaatttag
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