Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb0642
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Entry
Ldb0642 CDS
T00364
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Pathway
ldb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ldb0642 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb0642 (ung)
Enzymes [BR:
ldb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ldb0642 (ung)
DNA repair and recombination proteins [BR:
ldb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ldb0642 (ung)
Prokaryotic type
Ldb0642 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAI97471
UniProt:
Q1GB22
LinkDB
All DBs
Position
546313..546996
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AA seq
227 aa
AA seq
DB search
MKHFIGNDWDHVLAPVFESGEYHKLHVFLKKEYQTRQIYPDMYHIFTAFKLTPFKDTKVV
ILGQDPYHNPSQANGMSFSVMPGTPLPPSLRNIYKELYDDVGAQPVNHGYLKRWADQGVL
LLNAVLTVPYGQANGHQGKGWEMVTDAAIKALSERGQVVFILWGRFAQNKIPLIDQDKNV
IIKSAHPSPFSANRGFFGSRPFSRCNAALKEFGRAPVDWQLPPNPEA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattttattggaaatgattgggaccatgtgcttgccccggtttttgaaagtggt
gaatatcacaagctgcatgtttttttgaaaaaagaataccagaccaggcagatctacccg
gacatgtaccatatctttactgccttcaagctgaccccttttaaagacaccaaggttgtc
attttgggtcaggacccctaccacaatcccagccaggctaacggcatgagtttttctgtc
atgccgggcacgcccctgccaccgtccttgcgcaatatctataaggagctctatgacgat
gttggggcccagccggtcaaccacggctaccttaaacgctgggccgaccagggcgttctc
ttgctcaacgccgttttgaccgtgccatatggccaggctaacggccaccagggcaagggc
tgggaaatggtgacagacgccgctattaaggccttgagcgagcgggggcaggtagtcttt
atcctgtggggccgctttgcccaaaataagatacccctgatcgaccaggacaagaatgtc
attatcaagtcagcccacccgagtcctttttcggccaaccgcggcttctttggctcccgg
cccttttcaagatgcaacgcggccttaaaggagtttggccgggctccggtcgactggcaa
ttgccgcctaacccggaagcatga
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