Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb0645
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Entry
Ldb0645 CDS
T00364
Name
(GenBank) Putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Pathway
ldb03030
DNA replication
ldb03430
Mismatch repair
ldb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ldb0645
03430 Mismatch repair
Ldb0645
03440 Homologous recombination
Ldb0645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldb03032
]
Ldb0645
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb0645
Enzymes [BR:
ldb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ldb0645
DNA replication proteins [BR:
ldb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ldb0645
DNA repair and recombination proteins [BR:
ldb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ldb0645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI97474
UniProt:
Q1GB19
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All DBs
Position
complement(548577..549113)
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AA seq
178 aa
AA seq
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MMNFVAMDFETANQHPASACSLALVLVRESKIIDRFYTVINPQMAFDAQQVKVHDITAED
VAGAPTMAEVWPKIQPLFQPGMLVAAHNARFDCNVMKQSLARYGIAEPHYLVLDSLKVSR
ELEPGLDNYQLNTVSDLLGVELWHHHNALSDSEACAGILLKEEEKRGSELLKKFVYQV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcgtcgccatggactttgaaactgccaaccagcacccggccagcgcctgc
tctttggccttggttttagtgcgggagagcaagattatcgaccgcttttacacggtcatc
aacccccagatggcttttgacgcccagcaggtcaaggtccacgacattacggctgaagac
gtggcgggagccccgaccatggccgaggtctggcccaagatccagcccctttttcagccg
gggatgctggtggcggcccacaatgcccgctttgactgcaatgtaatgaagcagtccctg
gcccgctacgggattgccgagccccactacctggttttagacagcctcaaggtcagccgg
gaattggagccgggcctggataactaccagctcaacactgtctctgaccttttgggcgtg
gagctttggcaccaccacaatgccttaagcgacagcgaagcctgcgccggtatcctctta
aaagaagaggagaagcggggcagcgagcttttgaaaaagtttgtctaccaagtctag
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