Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb1919
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Entry
Ldb1919 CDS
T00364
Name
(GenBank) Putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Pathway
ldb03420
Nucleotide excision repair
ldb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ldb1919
03430 Mismatch repair
Ldb1919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb1919
Enzymes [BR:
ldb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ldb1919
DNA repair and recombination proteins [BR:
ldb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ldb1919
MMR (mismatch excision repair)
Other MMR factors
Ldb1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
AAA_30
SLFN-g3_helicase
AAA_14
NACHT
AAA_16
DEAD
DUF6576
Cep57_MT_bd
Motif
Other DBs
NCBI-ProteinID:
CAI98657
UniProt:
Q1G8K4
LinkDB
All DBs
Position
complement(1612353..1614632)
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AA seq
759 aa
AA seq
DB search
MVENSDRKAEQAHLDQVLQKIDQKGDQLKQAIAKDKSEARNISAHFYDDIRLDFDDYSTS
MDTALSIQQQQQMLKERDNAWQVNARELATLKRLHVHPYFARVDFEEAGEEPESIYIGLA
SFMDENNELLIYDWRAPISSIYYDGKIGKVTYYSPEGPVEVDMSKKRQFMIEDGTIINMF
DTDETIGDQMLMEVLSEKSSIQMKSIVKTIQKEQNKIIRDTTSDLLFVQGAAGSGKTSAI
LQRIAFLLYRYRGNLKSGNVIMFSPNQLFNDYIENVLPEMGEQNMVQMTYWQFIARRLPK
MKVQNLFDQFEDRQADTAIGRFKDSLAFYKLATRYGQHLNQSGMIFRNIYFRTKKKPFFS
KEEIKELYYSFNENYKLGNRIDATREELIRRLNKRVANEARKVWVSREIEGLSHEQMLDM
YDRPDQEFSSEKAERAFLGKKIVIKHLSKLARRINHNGFLNLRGQYLAFLRAVPKMTDLA
KYGISEEEWLTHVEEVKAKFKEQEIDLRDASAYLYLYDQIIARQTNLEMRYCFIDEIQDY
SAFQLAYLRYNFPRAKFTMLGDLNQAIFTKDESSSLLKQISGLFDPEKTKLVQLTKSYRS
TKQLTDYTKQILRHGEKIESFNRQGPLPQVWGRSDEAGALAALKAALAENDAQKLTTAII
TKDLEAAKKLADQLEGVHLISSANQRLVEGNLVLPSYLAKGLEFDAVIMWDASKAAYHEE
DETQLVYTIASRAMYKLDLVYAGEKSPLLPTNEATFAKK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaactcagaccgcaaagcagaacaagcccacctggaccaggtcctgcaaaag
attgatcaaaagggggaccagctcaagcaggctatcgctaaagacaagtccgaagcccgc
aacatcagcgcccacttctatgatgatattcgcctggactttgacgactactcgacctca
atggacacggccctgtcgattcagcagcagcagcaaatgctcaaagaacgcgacaatgcc
tggcaggtcaacgcccgcgaactggctactttaaagcggctgcatgtccatccttacttc
gcccgggtcgactttgaggaggctggcgaagagccggaaagtatctacatcggcctggcc
tccttcatggacgagaacaatgagcttttgatctatgactggcgggccccgatctcctca
atctactacgatggcaagatcggcaaggtaacctactactcaccggaagggccggttgaa
gtcgacatgagcaagaagcggcagttcatgatcgaagacggaaccatcatcaacatgttc
gacactgacgaaaccatcggcgaccagatgctgatggaagttctgtcagaaaagtcctcc
atccagatgaagtccatcgtcaagaccatccaaaaggagcaaaacaagatcatccgggat
acgaccagcgacctgctctttgtccagggggcggccgggtctggcaagaccagtgccatc
ctgcagcggatcgccttcctcttgtaccgctaccggggcaacctcaagagcgggaacgtg
atcatgttcagtcctaaccagctttttaacgactacatcgaaaacgtcctgccggaaatg
ggcgagcagaacatggtccagatgacctactggcagtttatcgcccgccgcttgccgaag
atgaaggtgcagaacctctttgaccagtttgaagaccggcaggctgacacggcaatcggc
cgcttcaaggattcgctggccttctacaagctggctacccgctacggccagcacctgaac
cagtccggcatgatcttccgcaatatctatttccggaccaaaaagaagccgtttttcagc
aaggaagaaatcaaggagctctactactccttcaatgaaaactacaagctgggcaaccgg
attgacgctacccgcgaggaactgatccgccgcttgaataaacgggtggccaatgaagcc
cgcaaggtctgggtcagccgggaaatcgaagggctcagccacgagcagatgctggacatg
tacgaccggccggaccaggaattctcttcagaaaaggcggaacgggccttcctgggcaaa
aagattgttatcaagcacctgtccaagcttgcccgccggatcaaccacaacggcttcttg
aacctgcgtggccagtacctagcctttttgcgggccgtgccgaagatgacggacctggcc
aaatatgggatcagcgaagaagaatggctgacccatgttgaagaagtcaaggctaagttc
aaagagcaggaaattgacctccgagatgcttcagcctatctttacctttacgaccagatc
attgcccgccagaccaacctggagatgcgctactgctttatcgacgaaatccaggactac
tcagccttccagctggcctatctgcgctacaacttcccccgggccaagttcaccatgctg
ggcgacttgaaccaggcgatttttaccaaggacgagagcagcagcctcttaaagcagatc
tccggtctctttgacccggaaaagacaaagctggttcagttgaccaagtcctaccggtca
accaagcagctgactgactacaccaagcagatcctccgccatggtgaaaaaatcgaaagt
ttcaaccggcaggggcctttgccgcaagtctggggcagaagtgatgaagctggcgcttta
gcggctttgaaagcagctttggcggaaaacgatgcccaaaagctgacgactgccatcatc
actaaggacctggaggcggccaaaaagctggctgaccagcttgagggggtccaccttatt
tccagcgccaaccagcgcctggtggaagggaacctggtcttgccgtcctacctggccaag
ggactggaatttgacgccgtaatcatgtgggatgcctctaaagcggcctaccacgaagaa
gacgagacccagttggtctacacgatcgcttcccgggccatgtacaagctggacctggtt
tacgctggtgaaaagagtccgcttttgccaactaatgaagcaacttttgcaaaaaagtaa
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