Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb2215
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Entry
Ldb2215 CDS
T00364
Symbol
trmE
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ldb03016
]
Ldb2215 (trmE)
Transfer RNA biogenesis [BR:
ldb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Ldb2215 (trmE)
Prokaryotic type
Methyltransferases
Ldb2215 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
GTP_EFTU
AIG1
MMR_HSR1_Xtn
Csa3_N
ATP-synt_ab
Roc
ABC_tran
AAA_22
DUF5631
Tyr-DNA_phospho
Motif
Other DBs
NCBI-ProteinID:
CAI98939
UniProt:
Q1G7Z4
LinkDB
All DBs
Position
complement(1861929..1863314)
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AA seq
461 aa
AA seq
DB search
MVQRLTEFDTIAAISTPLGEGGISIVRVSGEDAVAIVNRLFKGKDLEKVPSHTINYGHIV
DPATGQVIDEVMASVMLAPKTFTKEDIVEINCHGGIVVTNDILQLLLANGARMADPGEFT
KRAFVNGRIDLTQAESVMDIIRAKTDKARQVAVKQLSGGLLTEIRALRQEILDVLANVEV
NIDYPEYDEEEVTAQKLLACAEAVSGKIDRLLETAQEGQILRNGLKTAIVGRPNVGKSSL
LNYLTQSDKAIVTDVAGTTRDTLEEFVSVKGVPLELIDTAGIHHTEDQVEKIGVERSKKA
IAQADLILLLLDGSQELTEEDRQLLELTAGKKRIIVLNKTDLGQKLTAAEIAKESGSEVI
STSIMMKENLDELEALIKKLFFKGIENSNDQVLVTNQRQAGLLAKAKQQLADVASGLEAG
MPVDLVQIDFTGAWESLGEITGDSAPDELINDLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacgtttaacggaatttgatacgatcgcggcgatctcaacgccgctgggagaa
ggcgggatctccatcgtccgcgtctccggggaagatgcggtcgccattgtcaaccgcttg
tttaagggcaaggacctggaaaaggttcccagccacacgatcaactacggccacatcgtg
gacccggcaaccgggcaggtgatcgacgaggtcatggcctccgtcatgctggcgccgaag
acttttaccaaggaagacatcgtggaaatcaactgccacggggggatcgtggtcaccaat
gacatcctgcagctgctcttggccaacggggccagaatggctgacccgggcgaatttacc
aagcgggccttcgtcaacgggcggatcgacctaacccaggctgaaagcgtgatggacatc
atccgggccaagactgacaaggcccggcaggtggcggtcaagcagctttccggcggcctt
ttgacggaaatccgggccctgcgccaggaaatcctggatgttttggctaatgtcgaagtc
aacatcgactacccggaatacgatgaagaagaagtgacggcccagaagctgctggcttgc
gcggaagccgtcagcggcaagattgaccgcctgctggagacggcccaggaggggcagatc
ctcagaaacggcttgaagacagccattgtcggccggcctaacgtgggcaagtcctccctt
ttgaactacctgacccaaagcgacaaggcgatcgtaacggacgtggccgggaccacccgg
gacaccctggaagagttcgtgtctgtcaagggggtgcccttggagttgattgacacggct
gggattcaccataccgaggaccaggtggaaaaaatcggggtcgagcggtcgaagaaggcc
attgcccaggcggacttgatcctgcttttgctggacggcagccaggaattgacggaagaa
gaccggcagcttttggaactgaccgccggcaaaaagcggatcatcgtgctgaacaaaacg
gacctgggccagaagctgaccgcggctgagattgctaaagaaagcggcagtgaagtgatc
agcacctcgatcatgatgaaggaaaacctggacgaattggaagccttgatcaagaagctc
ttcttcaaggggatcgaaaactccaacgaccaggtcctggtgaccaaccagcggcaggcg
ggccttttggccaaggccaagcagcaattggccgacgtggccagcgggcttgaggcaggg
atgccggttgacctggttcagatagactttaccggggcctgggaaagcctgggggaaatc
actggtgacagcgccccggatgaattgatcaatgacctctttagtcagttctgcttaggg
aaatag
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