Leptinotarsa decemlineata (Colorado potato beetle): 111502378
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Entry
111502378 CDS
T07512
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111502378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111502378
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111502378
Spliceosome [BR:
ldc03041
]
Complex C
Other components
Step II factors
111502378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
GIPC1_GH2
Helicase_C
S1
HA2_N
AAA_22
DEAD
AAA_19
TRI4_N
Cullin_Nedd8
Flavi_DEAD
nSTAND3
AAA_30
Cas3-like_C_2
Sigma54_activ_2
AAA_16
UvrD-helicase
TsaE
Motif
Other DBs
NCBI-GeneID:
111502378
NCBI-ProteinID:
XP_023012219
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MNETKKLEHASLVSKICTQLENHIGLNDKDVAEFIIHLSEENNTLESFTKVIKDNDIELS
DSFIADLLHIIQDNNGRIAKMSEKAPTTEKMNEVEKLEYLSLVSKVCTELENHLGLNDKD
VAEFIIHLSEKNNTLETFTKALVDCGSGFSDSFIANLLRIIQHMKPPKNQSKEEAAITQK
EVLAKKFPGLSIPNEPQKPLDLEGNENDSIDTDIVADMMKQFEADAPSKKDNIEKDSSRS
KDGKNRNDRKRSTSRHRSSRRSRSRSPKRRRLSPRSSDSNSRKDQEPRKRSRERKRSIER
GDGVRSRERRGRSRSRDQRGRSRSGTRRDRSGSRGRHQRNKSREKRRERNPEKRKQERNS
PEFEDDPVPGKIYCGKVSNIVPFGCFVQLEGLRRRWEGLVHISQLRAEGRVTNVSEVVSR
GSKIKVKVLTVTGQKVSLSMKDVCQMTGKDLNPHSHAPLEREDKDRNPDRPAYSSTSVLR
LPVSIDEGEEDSRKRVTRISSPERWEINQMISSGCIDKSELPEFDEDTGLLPKDEDGGEA
DIEIELVEDEPPFLQGHGRAVHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQRE
QEVDSQPSGKNKNWIDPLPEEESKATTVRGIGLQSQDLPEWKKHVIGGKKSSFGKKTNLS
IIEQRQSLPIYKLKEELRKAVTDNQILIVIGETGSGKTTQITQYLAEAGLTARGKIGCTQ
PRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETMIKYMTDGMLLRECLMDLDLK
QYSVIMLDEAHERTIHTDVLFGLLKQAVLKRKELKLIVTSATLDAVKFSEYFFKAPIFTI
PGRTFPVEVLYTKEPETDYLDASLVTVMQIHLREPPGDILLFLTGQEEIDTACEILYERM
KSLGPDVPDLIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIFYVVDP
GFVKQKVYNSKTGMDSLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPV
PEIQRTNLTTTVLQLKTMGINDLLNFDFMDAPPVESLIMALEQLHSLSALDDEGLLTRLG
RRMAEFPLEPNLSKMLIMSVDLLCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ
PEGDHLTLLAVYNSWKNNKFSNAWCYENFVQVRTLKRAQDVRKQLLGIMDRHKLDVVSAG
RNTVRIQKAICSGFFRNASKKDPQEGYRTLVDGQVVYIHPSSALFNRQPEWVIYHELVQT
TKEYMREVTTIDPKWLVEYAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEANAWRISRVR
RRRN
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactaaaaaattagagcacgcctcccttgtttcgaaaatatgtacacaactg
gagaatcatatagggttaaacgacaaggacgtagctgaattcataatacatttatctgaa
gaaaacaatactcttgagagttttacaaaagtaatcaaagataatgacattgaattgtcg
gattctttcattgctgatctgcttcatattattcaagacaataatggtagaatcgctaaa
atgagtgagaaagctcctactactgaaaagatgaatgaagtagaaaaattggaatacctg
tctcttgtatcgaaagtgtgtacagaattagaaaatcatcttggactcaatgataaagac
gtagctgaatttatcatacatttatctgaaaaaaacaatacgcttgaaacattcaccaaa
gcactcgtggactgtgggtctggattttctgattcttttattgctaatctactacgaatt
attcaacacatgaaacccccaaaaaatcagtcgaaggaagaggctgccattactcaaaaa
gaagtattagccaagaaatttccaggattatccattcctaatgagcctcagaaaccactt
gatcttgaagggaatgaaaatgacagcattgatacagatattgtagcagatatgatgaaa
cagtttgaagcagatgcaccttcaaagaaagataacattgaaaaggattcaagccgaagt
aaagatggtaaaaatagaaacgatagaaaaaggtcaacttcccgacacagaagtagcaga
agatcaagaagtagatcacctaagagacgaagattaagtcctagatcttctgatagcaat
tccagaaaagaccaagaacctagaaaaaggtcaagggagcgaaaaagatctatagaaagg
ggtgatggggtcagatctagagaaagaaggggtagaagtagatcaagagatcagaggggt
agaagtagatctggaactagaagagacagaagtggatcaagaggaagacaccaaagaaat
aagtcaagggaaaaaaggagggagaggaatccggaaaagagaaaacaagaaagaaatagc
cctgagtttgaggatgacccggttcctggaaagatatattgtggaaaagtctcaaacatt
gtgccatttgggtgttttgtccaactagagggactcagaagaagatgggaaggactggtt
catatatcacaacttcgggcggaggggagagtaaccaatgtctctgaagttgtttctaga
ggaagcaaaattaaggtgaaagtactgactgtgacaggtcaaaaagtctccctgtctatg
aaagatgtttgccaaatgaccggtaaagatttgaaccctcactctcatgctcctttggag
cgtgaagataaagatagaaacccagatagacctgcatacagtagcacatcagtgctgaga
cttcctgtaagcatcgatgaaggcgaggaggattcaagaaaaagagttacgaggatttct
agccctgaacgatgggaaatcaatcagatgatatcatccggatgtattgacaagagtgag
ttgcctgagttcgatgaagatacagggctgttacccaaagatgaggatggaggcgaagca
gatatagaaattgagttagttgaagatgaaccgccatttttacaaggtcatggtcgagct
gtgcatgatctgagtccagtacgaatagttaaaaatccagacggatctctagcgcaggct
gctatgatgcaatctgctttagctaaggaaaggcgggaacagaagatgctccaacgagaa
caggaagtcgattctcagccatcaggaaaaaataagaattggatagaccctcttccagaa
gaagaatccaaagctacaactgtccgagggattggcttgcaatcacaagacttaccagag
tggaaaaaacatgtgataggtggcaaaaaatcttcattcggaaagaaaacaaatctatca
ataattgaacaacgtcaatcacttccaatttataaactgaaagaagaactaagaaaagca
gtcactgataatcagatcctcattgtaataggagaaacaggatcaggaaaaactacgcaa
atcacccagtacctggccgaagcgggactaactgctcggggaaaaattggatgtactcag
ccaaggcgtgtggcagccatgtctgtggcaaaacgagttgctgaagaattcggttgcaga
ttagggcaagaagttggatataccatacggtttgaggattgcacgagcccagaaacaatg
atcaagtacatgacagacggtatgttattgcgagaatgtctcatggacttggacttgaaa
cagtactcggttattatgctggatgaagcccacgaaaggacaatccatactgatgtactg
tttgggctactcaagcaagctgttctgaaacgaaaggagttaaaactgattgtcacttct
gctacactggatgcagtcaagttttctgagtattttttcaaagctcctatttttaccatt
cctggtaggacttttccggttgaagttttatatacaaaagagccagagactgattatttg
gacgctagcttggtgactgttatgcagattcatttgagggaaccgcctggtgatattctt
ttgtttttgactggacaagaagaaattgacactgcttgtgagattttatacgagcgaatg
aaatctttaggtcctgatgttcctgatctaatcattcttcctgtttactccgcacttcct
tctgaaatgcagacacgaatttttgaacctgcaccaccaggcagcaggaaggttgtaatt
gctactaacattgcagaaacatcacttaccatagatggaattttctacgttgtagacccc
ggattcgtgaagcaaaaagtttataattctaaaactggaatggattctttagtcgtgaca
cccatatctcaggcacaagccaagcaaagggcaggacgagctggacgaaccggccctgga
aaatgttacaggctttatacagaacgggcatatagggacgaaatgttgccaaccccggtt
ccagaaattcagcgaacgaatctaacaaccaccgtactccaactcaaaacaatgggtatc
aacgacttgctgaattttgatttcatggacgcaccaccagttgaatcactaatcatggct
ttggaacagcttcattcgttatcagctttggacgatgaaggattgctaacaaggctaggt
agaaggatggcagagtttcctctagaacccaatctttccaagatgctcataatgtcagtt
gatctactatgctctgatgaaattttaacaattgtcagcatgctctccgtgcagaacgtc
ttctatcgacctaaagataaacaagctttggctgaccagaagaaagcaaagttcaatcag
cccgaaggcgaccatctcacccttctcgctgtgtataatagttggaaaaacaacaaattt
tccaatgcttggtgttatgagaatttcgtccaagtaaggactttgaagcgtgcccaagat
gttagaaaacaattgttgggtattatggatcggcataaactggacgttgtatcagcagga
agaaataccgtgaggatacaaaaggctatatgttcagggtttttcagaaatgccagcaag
aaggatcctcaagaaggatataggaccctggtggatggtcaagtggtttacatacatcct
tcaagtgctctgttcaacagacagcctgagtgggtgatatatcacgagctagtacaaaca
acaaaagaatatatgagagaagtaactaccatcgatccaaaatggttagttgaatatgcc
cctgcattctttaaattctcggatccaacaaagctgtccaaattcaagaaaaaccagagg
ctggagccattgtacaataagtacgaagaagccaatgcttggagaatatcaagagtgaga
agaagaagaaactaa
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integrated database retrieval system
