Leptinotarsa decemlineata (Colorado potato beetle): 111502527
Help
Entry
111502527 CDS
T07512
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111502527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111502527
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111502527
U7-dependent histone pre-mRNA processing factors
111502527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
111502527
NCBI-ProteinID:
XP_023012398
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MTSIIKVHALSGAMDESPPCYILQVDEVRILLDCGWDEKFNMEFIKEMKRHVHTIDAVLL
SYPDVTHLGALPYVVGKLGLNCPIYSTIPVYKMGQMFMYDLYQSQHNMKEFCIFSLDDVD
ATFEKIIQLKYNQTVPLKGKGYGLTVTPLPAGHMIGGTIWKIMKVGEEDIIYANDFNHKK
ERHLNGCELEKLQRPSLVIIDAFNATYQQARRRARDEKLMTNILQTLRNNGNVLIAVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLTNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHTQGELSKVSSPKVVLASSADMESGYSRELFLQWCSNPANSVILTTRTS
PGTLARDLVDNGGERTVDLTVEKRVRLEGAELEEYEKRQRERCEDDETKEEGDSDSDDDI
EMSVISKGRHDIVIKQEGKISTGFFKVTKKMYPMYPFHEEKVKSDEYGEIIRPEDYKLAD
VPLEGEDNKENLVVKKEEEEITEIPEMPTKCIVLQRTVQVNCQVHYIDFEGRSDGESLMK
ILSHLKPRRVIVVRGTAENTAVIAKYCEENVQVARVLTPAKGEIVDATSETHIYQVRLTD
ALVSHLAFQKAKDAEVAWLNAQIVVRETQADAKRMNIDNEPMEIDDDDMRILTLEPASEE
DNHEPVFINELKLAEFKQILARSNISSEFSGGVLWCSNGTIAIRRVDPGKIMLEGCISED
YYRVKELLYEQYAIL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattattaaggttcatgctctctctggggctatggacgaatcgcccccttgt
tatattcttcaagtagatgaagtcagaatattgctagattgtggttgggatgagaaattc
aacatggaatttatcaaggaaatgaaaaggcatgtacataccatagatgcagtattactt
tcttaccctgatgtgacacacttgggagctttaccttatgttgttggaaagcttggtctc
aattgtcctatctactcaacaataccagtttataaaatgggacagatgttcatgtatgat
ttgtatcagtcccaacacaatatgaaggagttttgtatattttctctagatgacgtagat
gctacctttgaaaaaatcatacagctgaaatataaccagactgttcctctgaaaggaaaa
gggtatggtcttacagttacccccttacctgcaggtcacatgattggaggtacaatctgg
aaaattatgaaggtaggagaagaggatataatatatgctaatgatttcaaccacaaaaag
gaaaggcacctgaatggttgcgaacttgaaaaacttcaacgaccctctttggtaattatt
gatgccttcaatgccacttatcagcaagcaagacgaagagcaagagatgagaaactgatg
acaaacattcttcagacactgagaaacaatggtaatgttctcattgctgttgatacagct
ggacgagtattggagttagcccatatgcttgatcaactgtggcgcaacaaagaatctggt
cttcttgcatattctttagcattactaactaacgttagctataacgttgttgagtttgcc
aagtcgcagattgagtggatgagtgataagttgatgagaagttttgaaggggctcgaaac
aatccattccagtttaaacatttacagttgtgtcacactcagggagagttgagcaaagtt
tccagtccaaaggttgtgcttgctagttcagcagatatggaaagtggctactccagggaa
ctgttcctacagtggtgttcaaatcctgccaacagtgttattttgaccacaaggacatct
cctggtactctagctagagacttagtggataatggaggagagaggaccgtagatttaaca
gtagaaaagagagtcaggttggaaggagcagaacttgaagaatacgagaaacgacagaga
gaaagatgtgaagacgatgaaaccaaagaagaaggtgattcagattctgatgatgacatt
gagatgtcagtcatttcgaaaggcaggcacgatattgtcataaaacaggaaggcaaaatt
tctacagggtttttcaaagtaacaaaaaaaatgtatccgatgtacccattccacgaggaa
aaagtcaagtctgatgaatatggagagatcatcaggccagaagattataaattagcagat
gtgcctttagaaggagaagataataaagaaaacttggtagttaaaaaagaagaagaggaa
ataactgagatcccggagatgccaaccaagtgcattgttcttcaaaggactgtccaggtc
aattgtcaagtgcattatatcgactttgaaggtcggtccgatggtgaatccctcatgaaa
atattatcacatcttaaaccaagacgagtgattgttgttcgaggtactgcagagaataca
gcagttattgcaaaatactgtgaggagaatgttcaagttgcgagggtacttactcctgct
aaaggagaaattgtggatgcgactagcgagactcatatctaccaggtgcgtcttacagat
gccttggtatctcatttagcattccaaaaagccaaagacgcggaagtagcatggcttaat
gcccaaatagtcgtaagggagacccaggctgatgctaagagaatgaacattgataatgaa
ccaatggaaattgacgacgatgacatgaggatactcactttagagccagcctccgaagaa
gataatcatgaacccgtattcataaatgaactgaaattggcagaatttaaacagatttta
gcaaggagtaatatcagttcagaattttctggaggagttttgtggtgttcgaatggaact
attgcgatacgaagggtggatcctggcaaaataatgctggaaggttgtatatcagaagat
tattatagggttaaggaacttttatatgaacagtacgcaattttataa
DBGET
integrated database retrieval system
