Leptinotarsa decemlineata (Colorado potato beetle): 111503922
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Entry
111503922 CDS
T07512
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111503922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111503922
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111503922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
111503922
NCBI-ProteinID:
XP_023014126
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MTEEIETEKDCQSKSYSIPGHENLDVFIKGGFKILVEAIKNSNSLPQGSNWNFYNTHDSF
VKIINEESKNILKAANTILHTNHVEGNIRNRGSEEKNELLIEANDMILERVANNIDEMNG
IKKSIVEPVLIQTVSAQLPINGSWNRASNATFSVGSSITTEENANKPSNAIRLLTAKNII
RPQTFFKDKIINSNKYPWEPRLKEKPNSLKPLAIFLEETEHGEEFSHPYEFELERFTPLP
EQLLKETPAVPLPLEKTPLIEVTQPEQVNELVETLRNCKEFAVDLEHHSYRTFMGITCLM
QISTRDTDYIIDTLALRDKLHVLNEVFTKPTIVKIFHGADSDIKWLQRDLSLYVVNMFDT
YQASKQLGYSGLSLAYLMQKFCNFVPNKQFQLADWRIRPLPEQLKSYAREDTHYLIYIYH
KLKNELLETANGFDNLLVSVINKSTEVCKQRYLKPILREDSHLDFYRKCKRLFDNRQLYA
LKELYKWRDVISREEDESTGYVLPNHMLLQISESLPREMQGILACCNPIPPLVRSNLLEL
HQIILKAREQPLEKPILKEDTRARGTTKKISKINVDSPLHCPHDLTKTNDFRDDLPTLLG
NLELKKFHECVNDELALERCTPTFSVFDGDKIQVEDANDTRKKLQSFKFLTPFERYKLVK
PFIQEEEEKLAAAEKDKETEEQPPNSGITSKEEGFLQTDEERIESIREHFLKLSKMAPSI
IPIENLDKSLVQMGGTKKRKRDSSLPEDQETAEDNIFTPAPTPTVVNNNNARKRKSNDRD
GSNTPKKKKNRKNFWRQKSEDNLRRQDITQHAQNNDRLRDYPHSSETVDNYNSCTNRVNE
NDNIPGKEKKRNKKKKRNNQTDRGHGYLNRGGQNSWNGQSRPGEQQSQDFPGQQSQDFPG
QQSQDFSGRDDNFAGFDYSSVDFNQFQGGAGNANRPKGLNSNFKSRGRKRGGSKGHNRST
TFRSINKSLGRGRGRGR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaattgaaactgagaaggattgtcaatctaagtcctattctattcctgga
catgaaaatcttgacgtcttcatcaaaggagggtttaaaatcctcgtcgaggctattaaa
aattccaattcacttccacaaggatccaactggaatttttacaatacccacgattctttc
gtgaaaatcattaacgaggagagtaaaaatattcttaaagcagccaataccattttacat
acaaatcatgtagaaggaaacatccgtaatcgaggatctgaagaaaaaaatgaactactg
atagaagcaaatgatatgattcttgagagagttgctaataacatagatgaaatgaacgga
ataaaaaaatcaattgtcgaacctgttttaatccaaactgtgagcgcacagttgcccata
aatggatcttggaatcgtgctagtaatgctacattttcagttggttcttctatcacaaca
gaggaaaacgccaataaaccgagcaatgctatcagactattgacagctaagaacattatt
cgtcctcaaacatttttcaaagacaaaattatcaacagtaacaaatacccatgggagcca
cgtttgaaggagaaacccaattcattgaaaccactcgccatatttttagaagaaactgaa
catggagaagagttttctcatccttatgaatttgaattggaaagattcacccctttacct
gaacaacttctgaaagaaactcctgctgttccacttcctctggaaaaaacacctctgatt
gaagtgactcaaccggagcaagtgaacgagttagtcgaaacattaagaaactgcaaagag
tttgctgtagacttggaacaccactcttatagaacgtttatgggcataacatgtctcatg
cagatttctacaagagatactgactacattatagatactctagctcttagggataagctg
catgtcttgaatgaagttttcacgaaaccaactattgtgaagattttccatggagcagac
tctgatattaagtggctccaaagagatttatctctgtacgtagtcaacatgtttgatact
tatcaagcctccaaacaattgggttactctggtttgtctttggcttaccttatgcagaaa
ttctgtaactttgtaccaaacaaacagtttcagttggctgattggagaatcagacctctg
cccgaacaactgaagtcctatgctagagaagatacacattatttgatatacatttaccat
aagctgaaaaatgaactgttggaaacggccaatgggttcgataatttactagtatctgtg
ataaataagagcacggaagtatgcaaacagcgatacctgaagcccattttaagagaggac
agtcacctagacttttacagaaaatgtaaacgattgttcgacaaccggcaactatatgct
ttgaaagaactctacaaatggagggatgtgatctcgagggaagaagatgaaagcactggg
tacgttctacccaaccacatgttattgcagatatcagagtcgttacccagagaaatgcaa
ggtattttggcttgctgtaatcccattccgcctttggtcagatctaacttattggaactt
catcagatcattctcaaagccagagaacaaccattagaaaagccgatattgaaggaagat
acccgagctagaggcacaacaaaaaagatttccaaaataaatgttgatagtcccttgcat
tgccctcatgatttgacaaagaccaatgactttcgagatgatcttcccacactcctgggt
aatttagaattgaagaaattccatgaatgtgttaacgatgaattggccttggaaaggtgc
acaccaacattttcagtttttgatggggacaaaatacaagttgaggatgccaatgacact
agaaaaaaactgcagagtttcaaatttttgacaccattcgaaaggtacaagttggtcaaa
cctttcattcaggaagaagaagaaaaactagctgctgctgaaaaagacaaagaaacagaa
gaacaaccccccaattctggtattacatcaaaagaggaaggattcttacaaacagacgag
gaacgaatagaatctattcgtgaacattttctgaaactatccaaaatggcaccttcaata
attccaattgagaatcttgataaaagtttggttcaaatgggtggtactaagaagaggaaa
agagattcgtcacttccagaggatcaggaaactgcagaggataacattttcacacctgcc
cctacacctactgtggtgaataataacaatgcaaggaaaagaaaatcaaatgatcgcgat
ggcagtaatacccccaagaaaaagaaaaatagaaagaatttttggagacagaaatcagaa
gataatttgagaagacaagacattacccaacatgcacaaaacaatgatcgattgagagat
tacccccactcaagtgaaactgtggataattataatagttgcactaatagagtaaatgaa
aatgataatataccggggaaagaaaagaagcgaaacaaaaagaaaaagaggaataatcaa
actgatagaggacacggttatctaaatagaggtggccaaaacagctggaacggtcaaagc
aggccaggggaacaacaaagtcaagattttcctggccaacaaagtcaagattttcctggc
caacaaagtcaagatttttcgggccgcgatgacaacttcgctggctttgattattcctca
gtagattttaaccaatttcaaggtggtgcaggcaatgctaataggcctaaagggcttaac
agtaatttcaaatctaggggtagaaaaagaggcggaagtaaaggccataataggtcaact
accttcagaagcatcaataagagtttggggcgaggacgaggaaggggacgttga
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