KEGG   Leptinotarsa decemlineata (Colorado potato beetle): 111505553
Entry
111505553         CDS       T07512                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
ldc  Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:ldc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ldc03000]
    111505553
   04121 Ubiquitin system [BR:ldc04121]
    111505553
Transcription factors [BR:ldc03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    111505553
Ubiquitin system [BR:ldc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111505553
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-C3HC4_4 zf-RING_UBOX zf-CCCH_4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-RING_2 zf-CCCH_12 zf-RING_10 zf-CCCH_UNK Vesi_VP2 PaaA_PaaC BT_3535-like zf-CCCH_DUS3L zf-RING_6 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 111505553
NCBI-ProteinID: XP_023016148
LinkDB
Position
Unknown
AA seq 913 aa
MPIQAPQWTEFLSCPVCCNLFDEKLRSPISLGCGHTICRGCLSHLHRKQCPFDQTNISID
IEILPVNSALLQLVGPNIRSAHYEIDCKVVPAEFLDQYLECKKCVEDLALYLKPHPSGSV
CGSGSILSRPMQRKLVTLINCQLVEDEGRTRAMRAARSLGERTVTELILQHQNPQQLSAN
LWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTSI
GHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDALRREHDAQIVQIATEAGLRIAPDQ
WSALLYGDAAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTGDPGKLSVLRNHLELLAG
IDPSPESSAPSWSECSECLEAVRLVVAGLVDFIHQHGNRKLQDTNHSQHAKYKISMCRDL
TLRGSCPRGVNCTFAHSPEELEKYRAKSRKTVPRTKDYHIDNQSPTEKNYNSSDDYYSVP
NTTTVSPVPLPAVVQIPRMGYDVPYHPNPTYSPAQQFPQPVYPPQAATFPVHEIYPSNHS
NVMVTNGGHYYQAQQGEYVNHQQPPQNVDVMKRSNWDAMISQIAKNQNYSPQQKSNRTST
KSLAELHQRKQEVISQLEKVVGKNAATEISNTASTLARQESQHDLDSPTSPYNFWTGQII
TGPTFVRSDSILAADDDYVPYETSSISKYGPISRMQKDNGISQSVSAAFRDTPPSLVRRP
VSSDSPVASYYYNNNSHFHQAPIPAGHALVGPPGTEGYVQYNNNNIYCQALSQGHNNVRD
LYGSQLLIHHPRLQDPSKELIAESHRVKIQLRNLEKQLNDLKIATQGVTNLSDSERLTQE
LQLIEQGIQEKQKEACLNKIVHSLKAMGNYNNGNPSVTSEDAMYEADIANDMRKLELRLQ
EELEEWSGEDSPK
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgcccatccaggcacctcaatggacagagttcctatcatgtccagtatgttgcaactta
ttcgacgaaaagctccgcagtcctataagcttgggctgtggacatacaatatgcagaggt
tgtctctcccatttacacagaaagcagtgcccatttgaccaaacaaacatcagcattgac
attgaaattttgcctgtcaactctgcacttttacaacttgttggaccaaacattagaagc
gcacattatgaaattgattgtaaagtagtacctgcagaatttttagaccaatacttggaa
tgtaaaaaatgtgtagaagatcttgctttatatttaaaaccccatccaagtggaagtgtt
tgtggaagtggaagcattctctcgagacctatgcagaggaagctagttactttaattaac
tgtcagctagtagaagatgaaggaaggacaagagcaatgcgagcagctaggtctctaggc
gagcgcacagtaactgagttaattttacagcaccaaaacccacaacagttatctgctaat
ttatgggctgcagtgagagcaagaggatgtcaatttttaggacccgcgatgcaagaggaa
gtattaaaacttgtactgctagctctagaagatggctcagccttatccaggaaagttttg
gtgatgtttgtagtacagagattggaaccacattttccacaggcttccaagacaagcatt
ggacacgtagtgcagttgttatacagggcttcgtgtttcaaggtttccaaacgagaaagt
gattcttctctcatgcaactaaaggaagaatttcgcacatatgatgcattgcgacgtgaa
catgatgcccagatagttcagattgctacagaggctggcctaagaattgctcccgatcag
tggtctgctctactatatggtgatgcagcacataagtctcatatgcagagtatcattgat
aagctacagacacctcagtcgtttgcacagtcggttcaagagttggtaatcgcattacag
cgaacaggagatccaggaaaattatctgtccttagaaatcatctggagttgttggcggga
attgatccgagtcctgaatcttctgctccttcttggagtgaatgttctgaatgtctggaa
gcagttcgattagttgtagcaggtttggtagacttcattcaccagcatggcaaccggaaa
cttcaagacacaaatcattcacagcatgccaagtacaaaataagcatgtgtcgtgactta
actttaaggggcagttgtccgagaggcgtgaattgtacttttgcgcattcacctgaggaa
ttagaaaagtacagagctaagagtcgaaaaactgtccccagaaccaaagattatcatatt
gacaaccagtctcctaccgaaaagaactataactcttcagatgactactactcagtacca
aacacaacgactgtgagtcctgttcctttacctgcggttgttcagataccacgaatgggt
tatgatgttccttaccatcccaatcctacatattcccctgctcaacagtttcctcaacca
gtgtatccaccacaagctgccacatttcctgttcatgagatatatccaagcaaccacagt
aatgtaatggtaaccaacggaggacattactatcaggcacaacaaggagagtatgtcaat
caccagcagcctcctcagaatgtggatgtcatgaaaaggtccaattgggacgcaatgata
tctcaaatagcaaaaaatcagaactactcaccacaacagaaatctaatcgtacctctaca
aaaagtctggcagagctgcaccaaaggaaacaagaagttatatcccaattggaaaaagta
gttgggaaaaatgctgctacagaaatatctaacacagccagcactctagctcgacaagag
tcccaacatgatttggatagcccaacttcaccttacaatttctggacagggcagataatt
acgggaccaactttcgtgagatcagactctatattggccgccgatgatgattatgtacct
tatgaaacatcttcaataagcaaatatggaccaatctcgagaatgcagaaagataatggg
atcagtcagtctgtgtctgctgcatttcgagatactcctccatcattggtaaggaggcct
gtatcatctgatagtccagtggcatcttattattacaacaacaatagtcatttccaccag
gcaccaatacctgctgggcatgctcttgttggtcctcctggtactgagggatatgtacaa
tacaataataataacatttattgtcaagcattaagccaaggacacaacaatgtcagggat
ttatatggatcccaacttttgatccatcatccaagactgcaagatccatctaaagaacta
atagcagagtcacacagagtcaaaatacaacttcgcaatctagaaaaacagttgaatgac
ttgaaaatagcgactcagggtgtaacgaacctgagcgacagtgagaggctcacacaagaa
cttcagttgattgaacagggtattcaggaaaagcagaaagaggcatgtttgaacaagatt
gttcattcactgaaagcgatgggaaattacaataatggtaacccatctgtgacgtcagaa
gatgcaatgtatgaagctgatatagccaacgacatgagaaaacttgagttgagactacaa
gaagaattggaagagtggagtggtgaagattcgcccaagtaa

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