Leptinotarsa decemlineata (Colorado potato beetle): 111506456
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Entry
111506456 CDS
T07512
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111506456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldc03400
]
111506456
DNA repair and recombination proteins [BR:
ldc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111506456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
ATPase_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
111506456
NCBI-ProteinID:
XP_023017290
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MKILFYWQHWLGLPPNKNFKKPNLFSVCNPESCILLIVKSNKNKFQNMVLPETTALNLDL
PQQQSFIRFYNNLPEKSPSTIRFFHRTDYYTVHGEDVTVAADFLSVAIKYMGDSPKLGYV
CFNKSKFESFVRELLLVRQYRVEVYVKASQKSNDWQLEYKGSPGNLTQFEEILFDNVQID
FTNSVMGVKIIQNRVLAISCVNITEAKFDVCEINDNESFSELEALIAQLGPKECIIPAGE
SPDLKALNTLLDRNGILVAKLKRSDFNVDNIMQDLNRLLFFHEDQQRNAAVYSETNMNDA
MGCLQALIKFLNLTGDEKNFNQFKLGTLNAHRFVRLDNAALYALNVLPKVASQNAEGVSS
VTASKYSSLKGILDNCVTPQGKRLLDQWIKQPLKDYNSLNDRLDIVESILNDAEARAILS
KDNLPRIQDLMPLSRKITCKKATLQDCYRVYQTINGVPAVLQTLRKIENKCVRDMLISPI
ADILSDLENYQSMIETTIDLDLVDRGEFLVKRNFDDELKELHRKKDRVGEKMQKVLKTSA
DDLGFEDGKTIKLECNDQHGYFLRVTLKEEPVLRKNKRYKILDAIKGGVRFTTDKLVELN
EEYKMLNADYIERQKAVVDEIFEVASGYADSLRTLNTLIATVDVLVSFAIAAISARIPYV
RPKLHKEASGILKLKKVRHPCLEAQDDVSFIPNDVSFQQNDKLFYVITGPNMCGKSTYIR
SIGLCVLMAHIGSFVPCAKADISVVDGILVRVGADDCQLKGLSTFMLEMIEISSIIKSAT
SNSLVIIDELGRGTSTYDGCGLAWAIAEHLVQETKCFSLFATHFHEINRLAEMNSNVGNL
HVTAVTTEKTITPLYSILEGECDKSYGIHCARMVGFPEDVIEDAIKYQKKLEHASGLKFI
SDFAPEVKRRIMEEGDDIIKNAIKKFKEDSLGMSREGLHKKKIEFRTAMGAEENLFIKGL
LSDIES
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgttctactggcaacactggttaggattaccgcctaataaaaattttaaa
aaacctaacctgttttctgtgtgtaatccggaaagttgtattttattaattgttaaatcg
aataaaaataagtttcaaaatatggtactgcctgaaacaacggctttgaatttggactta
ccacaacagcaaagcttcatcaggttttacaacaacttacctgagaagtctccatcaaca
attcggttctttcatcgcactgactactataccgtccacggcgaggatgttaccgttgca
gccgatttcctctcggttgccatcaaatatatgggcgacagtccaaaattaggctatgtc
tgtttcaataaatccaaattcgaaagtttcgttagggagttattgctggtgcgacagtat
agagtagaagtatacgtgaaagcatcgcagaagagtaatgattggcagttggagtacaag
gggtcgcctggaaatttgacgcagttcgaggagattctatttgataatgtccagattgat
tttacaaattcggtgatgggggtgaagatcattcagaatagggtattggcaataagctgt
gtgaatataactgaggcaaaatttgatgtatgtgaaataaacgacaatgagtcgttttca
gagttagaagcgttaatcgcacaacttggtccaaaagaatgcattataccagctggagag
tcaccagacctgaaggcattgaacacattgttagaccgcaatggaattttagttgctaaa
ctgaaaagatccgatttcaatgtagacaatatcatgcaagacctcaataggttgttattt
ttccacgaagaccagcaaagaaatgctgctgtttatagtgaaaccaacatgaatgatgca
atgggatgcctgcaggcattaatcaagtttctcaacttgacaggtgatgaaaagaatttc
aatcagttcaagctgggtacattgaacgcacacaggtttgtcaggttggacaatgcagca
ctttatgctcttaatgttctgcctaaggtagcatctcagaatgcagaaggcgtatcaagt
gttaccgcatcaaaatattctagtctgaaaggtattttggacaattgtgtaacacctcaa
ggaaagcgtcttttagaccaatggatcaaacagccattaaaagactacaactcactcaat
gatagacttgatattgtagaaagtattttgaatgatgctgaagctagagcgattctttca
aaagataatctcccacgaattcaagatctaatgccattgtcaagaaaaattacttgtaag
aaagctactctgcaggactgctaccgggtttatcaaactatcaatggtgtgccagctgtt
ttacaaaccttaagaaaaattgaaaacaaatgtgttcgtgatatgctgatcagtcctatc
gccgatattctatctgatttagagaattaccaaagcatgattgagacgaccatagatcta
gatttggttgatagaggggaatttttggttaaacgtaattttgatgacgaattgaaggaa
ttgcacaggaagaaggatagagttggtgaaaagatgcaaaaggttctaaaaacgtcagca
gatgatttaggttttgaagatggaaaaactatcaaactggagtgcaatgatcagcacggg
tattttttgagagttaccctcaaggaagagccggtgcttagaaaaaataaaagatataaa
atattagacgccattaaaggaggagtaagatttactactgataagttggttgagctgaat
gaagaatataaaatgttgaatgctgattatattgagaggcagaaagcagttgttgatgaa
atatttgaagtagcatctggatatgccgatagcctgagaactttgaacacgctcatagca
actgttgacgttcttgtttcgtttgccattgccgcgatatctgctcgcataccttatgtg
agaccaaaactccacaaagaagcttcaggaattttgaaactgaagaaagttagacatccc
tgtttagaagcacaagatgatgtatccttcattcctaatgatgtttcctttcaacaaaat
gacaaactgttctatgtgatcactggtccgaatatgtgtggtaagagcacatacatcaga
agtattgggctttgtgttctcatggcacacattggcagttttgttccttgcgcaaaagct
gacatctcggtggtggatggtattttggtcagagttggagctgatgactgtcagctgaag
ggattgtcaactttcatgctggaaatgattgagatatcttcaatcataaagagtgctacg
tctaattcgttggtaattatagatgagttgggcagaggaacttctacttatgacggttgc
ggacttgcatgggccattgctgagcatctcgtacaagaaacgaaatgtttttctctgttt
gcaacacacttccatgaaattaataggcttgcagagatgaattccaatgttggtaacctt
cacgtcaccgcagtaactacagaaaaaaccataactcctctttattccattcttgaagga
gaatgtgataaaagttatggtatccattgtgcaaggatggtgggatttcctgaagatgtt
atcgaggatgccataaaataccagaaaaagttggaacatgccagtggattaaaatttata
agtgattttgcacccgaagttaaaaggcgaataatggaggagggagacgatattattaaa
aatgccataaagaagttcaaagaggattcccttggaatgagtagggagggtcttcataaa
aagaaaattgaattcaggactgcaatgggagccgaagaaaatttattcatcaaaggttta
ctctccgatatcgaatcttga
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