Leptinotarsa decemlineata (Colorado potato beetle): 111507291
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Entry
111507291 CDS
T07512
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111507291
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111507291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
ZSWIM1-3_helical
Motif
Other DBs
NCBI-GeneID:
111507291
NCBI-ProteinID:
XP_023018350
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All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MSLFPAYEEQAKVQEPIWKKGKDESDTSWLTNSSFQIDLETSAKSGEIGKSVTIKVVDSK
KDKKEVPTHASNTRKRKKSRKKDIAEKKEKYDHSPILPGIEENFSIDVSGCRELLKVPTI
SGRPAPKYRVAYYLNVTQYRSKKKFKRYHELLPEKNTDGEQVITKQNIDQIGFASRDDNF
PGFKQEQELSQQTGFFNSHLENHPNDIEVWLDYIQFQNVVYQFEKTYRKGSIAKAQRVLA
ERKLSILDKAMSFNPESESLHRERLNIVVGTFPADEQQAYLKDLVEKDKGNIILWQGYIE
STQCSLSHCNTPAVLSLYTKCLSTLHQLRRTTFVEKNLLEENILKMLYQCGLYMKQAGLF
EQLWTLLRMYLELNLSPNDKTKFNITSGFREKQLIELEDIIFTSNLPLHELWLRTERLRE
SCHWLPYLDDENCEDPQRIVFTEDVAELIHPITVADNIFKLTATVFSLLKIPLLPCRHST
MRDLGLDYVPWSLDSIEPLLSVFLPLYPVEIAKEYLWIDNRLAVGPQYLKKIPGHEEYLN
FIIKIMENAASCLSGSDKIAITVWFFRFQRLLIVLDRMKLFTITDSFKKNIKKKIKEFLK
REENRQNEIYYLEYALIEYELGNTDNCFTIINTALSLNVKPKIVAENWLQSQTIWCFLYR
NLLDLILHMKKGSLNDKKALEALCEMILQRNKPELTESVLNEAETKLELISNQLIQNDIP
KLQPLHHFLPDFLTDWLMCHGWFIYLRKGPEECCTFLAASLQELEKKNSEPSWQKEVLNE
FYVAILFKYSRDKPAGGLVKLLDEVIFAAVEKYPNNLLLLSVLERQQTLVNSLGPRWWKV
QNLLLKSERALSSLFSVIIVNQQMVQLQEVTTDTITGNKYDVNTSLKNKMLALFKKITSN
VNTRKCGLVWRLYLQFVYTYFSPEICRNVYYSAVEECPWLKALYIDAAIYIPAELPQIQD
LIIEKQLRLHVTPEELDVLRN
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtttcctgcgtatgaagaacaggccaaagttcaagaaccaatatggaaaaag
gggaaagatgaaagtgatacaagttggttaacaaattccagttttcagattgatttagaa
accagtgctaaatctggtgaaataggaaaatcggtcactataaaagttgttgactctaag
aaagataagaaggaagtcccaactcatgcaagcaatacacgaaagcgaaagaagtcaagg
aaaaaagatattgctgaaaaaaaggaaaaatatgatcattcacccatactacctggaatt
gaagaaaattttagtatagatgtgtctggttgtcgggaattgttgaaggtacctactata
tctggacgtccagctcctaagtatcgtgtagcttactatttgaatgttacacagtatcgt
tctaagaaaaagtttaagaggtatcatgaacttttgccagaaaaaaatactgacggtgaa
caagttattacaaaacagaacattgatcaaattggatttgcatctagagatgataatttc
cctggattcaagcaagagcaggaattgtctcaacaaacaggtttctttaacagtcatctc
gaaaaccatcctaatgatatcgaagtgtggttggactacattcaattccaaaatgtggtt
taccagtttgaaaagacttatagaaaaggtagcatagctaaggcacagagagtattagct
gaaagaaaattatccattcttgataaagcaatgtccttcaatcccgaaagtgaatcatta
caccgggagagattgaacattgtggttgggacctttccagcagatgaacaacaagcatat
ctgaaggatttggtggagaaagataaaggtaatattatattgtggcagggttatatagag
tctacgcagtgctctttgtcacattgcaacacaccagcagtattgagcttgtacacaaaa
tgtttgtcgaccttgcaccagttgagacgtactacatttgtagagaagaatttattagag
gaaaatattcttaagatgttatatcagtgtggtctgtatatgaaacaggctggattattt
gaacaactttggaccctgctgaggatgtatttggagttgaatttatcacccaatgataaa
acaaagttcaacatcacctcaggtttcagagagaagcagttaattgaactggaggatatt
attttcacttctaatctgcccttgcatgaactctggttgagaactgagaggcttcgagaa
tcctgtcattggcttccttatttagatgatgaaaactgtgaggatcctcagcgcatagta
ttcaccgaagatgtagctgagttgatccatccaatcactgtggcggataacattttcaaa
ctcacggcaactgtcttttccctgttgaaaattcctttgctgccttgtcgtcacagcacc
atgcgagatttaggtctcgattatgttccatggagtttagactcgattgaaccactatta
tcagtgttcctgcctctttatccagtggaaattgccaaagaatatttgtggatagataac
cgcctggcggtaggaccacagtatttaaagaaaattcccggacacgaagagtacttaaat
ttcattattaaaataatggaaaacgctgcaagttgtttgtctggcagtgacaaaattgct
attactgtatggttttttaggtttcaaagacttctgatagtactagacaggatgaagtta
tttacaataacggacagtttcaagaaaaacatcaaaaagaaaattaaagaattccttaaa
cgggaggagaacaggcagaatgaaatttattatctggagtatgctttgattgagtatgaa
ctggggaataccgataactgcttcacaatcataaatactgcactaagtttgaatgttaaa
ccaaaaattgttgctgaaaattggttacagtcgcaaacaatatggtgttttctctataga
aatttgcttgatttaattctgcatatgaaaaaaggatctctaaatgataagaaagctctt
gaagcattatgtgaaatgatactccaaagaaataaaccagaattgactgaaagtgtactg
aatgaagcagaaactaagctagaactcatctcaaatcagttgattcaaaatgatatcccc
aaattacaaccattgcatcattttctcccagattttcttacagattggctcatgtgtcat
ggttggtttatatatcttaggaaaggacctgaggaatgttgtacatttctagcagcttct
cttcaagagcttgaaaagaagaattcagagccttcatggcaaaaagaagtactcaacgaa
ttttatgttgcaattttattcaaatattctagagataaacctgcaggcggattagtcaaa
cttcttgatgaagttatttttgctgcagtggaaaagtatcctaataatctactgctattg
tctgtccttgaaagacaacaaactctggtaaactctctaggaccaagatggtggaaagtg
caaaatttacttctgaagtctgaaagagctttgtcttcacttttttctgtaataatagtc
aatcagcaaatggtgcagttacaagaagtaacaactgatactattactggtaataaatat
gatgttaatactagcctgaaaaacaagatgctcgcactgttcaaaaaaattacttccaat
gtcaataccaggaagtgtggactagtatggagactttatttgcagtttgtttatacatat
ttttctccagaaatttgccgaaacgtttactattctgctgttgaagaatgtccatggctc
aaggccttgtacattgatgcggccatttatataccagcagaactgccccaaattcaggat
cttataattgagaagcagctcaggttacacgttactcctgaagaattggatgtgttgagg
aattaa
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