Leptinotarsa decemlineata (Colorado potato beetle): 111507325
Help
Entry
111507325 CDS
T07512
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111507325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111507325
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111507325
Spliceosome [BR:
ldc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111507325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
SLFN-g3_helicase
nSTAND3
T2SSE
SRP54
nSTAND_NTPase5
Cas3-like_C_2
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
111507325
NCBI-ProteinID:
XP_023018390
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSKQKLMKDHKLDETNMADNVEEARRKDLEERDEFAHRLKKRDENRTRNIAHPSGSKAYE
EAAKRLKLENADRGEIIPKLRVQSRRKYLEKRKEDKLQELEADIADDEYLFEEEILTERE
RKERYHKKELLKLAKEHEKARELERVHRYHMPRDLGKDSVSDYIEVDELEKVPQSEQKKW
EKDQMASAVFKFGAKDSVRTDEYELLLEDQIHFIQALQIPGVTEKKETKLTEVQKKKLSI
EETKKSLPIYPFKDDLIQAIREHQILIIEGETGSGKTTQIPQYLHEAGFTKNNKKIGCTQ
PRRVAAMSVAARVAQEMGVKLGNEVGYAIRFEDCTSSRTVIKYMTDGTLHREFLSEPDLQ
SYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDVAKFSEFFDDAPMFQI
PGRRFPVDIYYTKAPEADYVDACVISVLQIHVTQPLGDVLVFLTGQDEIESCQELLQDRV
RRLGSKVKEMIILPVYANLPSDMQAKIFEPTPPGSRKVILATNIAETSLTIDNIIYVIDP
GFAKQNHFNSRTGMESLMVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHELEDNTV
PEIQRMNLGNAVLMLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLG
RRMAEFPVDPMMAKMLLASEKYKCSEEIVSIAAMLSVNGAIFYRPKDKIIHADTARKNFN
HIGGDHLSLLNVYNQWRDSDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIEMVSN
ITETVNIRKAITAGYFYHIAKLSKAGNYKTVKHNQSVTIHPNSSLFEELPRWILYHELVF
TTKEFMRQVIEIESKWLLEVAPHYYKQKELEETNLRRKV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcaaaaactaatgaaagaccataaattagatgagacgaatatggccgataac
gtagaagaagcccgaagaaaagatcttgaagaaagagatgaatttgcccatcgtttgaaa
aaacgagatgaaaatcgtaccagaaatattgcacatccttcaggttctaaggcgtacgaa
gaagctgcgaagagactcaaattagaaaatgctgaccgcggtgaaattattcccaagctt
agggtgcaatctagaaggaaatacttggagaaacgtaaagaagataagcttcaagaactt
gaagctgatattgctgatgatgaatatctgttcgaggaagagatactgaccgaaagagaa
cgaaaagaaaggtaccacaagaaagaattattaaaacttgcaaaggaacatgaaaaagca
agagaacttgagcgagtgcatcgatatcacatgcctcgagatttaggaaaagattctgtg
tctgattatattgaagttgatgaattagaaaaagttcctcaatcggagcagaaaaaatgg
gaaaaagaccagatggcttctgctgttttcaaatttggtgcgaaagattctgtcagaaca
gatgaatacgagctattacttgaagatcaaatccatttcatccaagcattacaaatacct
ggtgtaacagagaaaaaagagactaaattaacagaggtacaaaaaaaaaagcttagtatc
gaagagacaaaaaagagtttgccaatatatcctttcaaggatgacttgattcaagctata
cgagaacaccaaatattaattatagaaggagagactggatcaggaaaaacaacacaaatc
ccacaatacttgcacgaagcaggatttacaaaaaataataaaaaaattggttgtactcag
cctcgaagagttgctgcaatgtcagtagcagcaagagttgctcaagaaatgggcgttaag
cttggaaatgaagtggggtatgctatcagatttgaagactgcacttcctccagaactgtt
attaaatatatgactgatggtacgttacacagagaatttttatcagagcccgatttacag
tcatatagtgttatgatcattgatgaggcccacgagagaacactacatacagatatttta
tttggccttgttaaggatattgccagatttcgaccagatttgaagttgttgatttcaagt
gctacactagatgttgctaaattctcagaattttttgatgatgcacctatgtttcaaatt
ccaggaagaagatttcctgtagatatatattacactaaagcaccagaggcagattatgta
gatgcatgtgttatatcagtgttgcaaatacatgttacacaacctctgggggatgtttta
gtatttttgactggtcaagatgaaatagaatcatgtcaagaactacttcaggatcgtgtt
cgaagattaggttcgaaagttaaggagatgattattttacctgtatatgctaatttaccg
agtgacatgcaggcaaaaatttttgaacctactcctccaggatccagaaaagttatactg
gctacaaatatagcagaaacttctttaacaatcgataacataatttatgttatagatcca
ggatttgctaagcaaaaccattttaactcacgaacaggaatggaaagtttaatggtagta
ccaatatccaaagcttcagctaatcaaagggcaggacgagcaggtcgagtggctgcagga
aaatgctttagattatacacagcatggtcctacaaacatgaattggaagataatacagtt
ccggaaattcaaagaatgaatttgggaaacgcagtattgatgttgaaagcacttggaata
aatgacttagttcattttgatttcctagatccaccaccacatgaaacgttggtattggca
ttagaacagctgtatgcattaggagctctaaatcatcatggcgaactcacgaaactagga
agaagaatggctgagtttccagtggaccctatgatggcaaaaatgttgttagcttcagaa
aagtacaagtgttccgaggaaatagtttcgatagcagccatgctgtcagtaaatggagca
atattttacagaccaaaggacaaaatcatacatgcggatactgcccgaaaaaactttaat
catattggaggagatcatctgagtttactcaacgtttataatcagtggagagattctgat
tattccacacaatggtgttatgaaaatttcatacaatatagatccatgaaacgtgcacga
gatgttagagagcagttggtaggtttgatgcagagagtagaaatagaaatggttagcaac
ataactgaaacagttaatatacgtaaagccataaccgccgggtatttttaccacatcgca
aaattgtccaaagcaggaaattacaaaaccgtgaagcacaatcaaagtgttaccattcat
ccaaacagttcactgtttgaggagctccctagatggattttatatcatgaattggtgttc
accactaaagaatttatgcgacaagttatagaaatagagagtaagtggttgctagaagtt
gcaccacattattacaagcagaaagaattggaagaaacaaatttgagaaggaaagtttga
DBGET
integrated database retrieval system
