Leptinotarsa decemlineata (Colorado potato beetle): 111508020
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Entry
111508020 CDS
T07512
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111508020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111508020
Spliceosome [BR:
ldc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111508020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
NBCH_WD40
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR75_2nd
WDR54
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
111508020
NCBI-ProteinID:
XP_023019204
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDDEEVPYTKKIKTIHYGSLEESEKSRLDVQNEGSNDSDPVLPSASQTQDAPEYMELED
AMSRDKQALLEEFERRRKARSINVSTDDAEVKRNLRQLGEPICLFGEGPADRRSRLRDIL
SRTGEDAVIKREAEEERKLFEKDQETTWYHEGPDSLRVARLWITRYSLPRAKERLEEATR
LADLPAATKTARTQEMQKKIQAMSIHSSQIGDTRPVSYCQFSPNSKLLATASWSGFCKVW
SVPDCELKQTLQGHKCNVGAIVFHPKATISQEDTICNMASCAVDGSVKLWDFTSHEPIAD
IEGHMPHRVSRLKFHPSGRFLGTCCYDNSWRLWDLEQCTEVLHQEGHVKPVYCISFQADG
SVCATGGLDAFGRVWDLRTGRCIMFMEGHLKSILGIDFSSNGFQIATASEDNSCKIWDLR
KRSILYTIPAHTNLISEVKFQPEHGSYLATASYDNTVKLWMNRTWQPLKTLSGHDGKIMS
VDISPDDQYIATSSYDRTFKLWTPELS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaagaggtaccttatactaaaaaaatcaaaacaattcattacggttca
ttagaagaatctgaaaagagcagacttgacgttcaaaatgaaggaagtaatgattcagat
cctgtgttaccatctgcatctcaaacacaggatgctccagaatacatggaactggaagat
gctatgtcaagggacaaacaagccctactggaagaattcgagagaagacgaaaggcaaga
tcaattaacgtatcgactgatgatgccgaggtgaagagaaacctcagacaattgggagaa
cccatttgtttatttggagaaggaccagctgatagaagatcgcgattgcgagatattcta
agcagaactggtgaagatgctgtgataaaaagagaggcagaagaagaaaggaagctgttc
gagaaagaccaagagactacttggtatcacgaaggtccggattctttgcgggtggctaga
ttatggataactcgatactccttaccaagagcaaaagagaggttggaggaggccacaaga
ttggcagatttacctgctgcgacaaagacagcgagaactcaagaaatgcagaagaaaatt
caggccatgtcgattcattccagtcagatcggagatactagacccgtatcttattgccag
ttcagccccaactcgaagctattagctacggcgtcatggtctggattctgtaaagtttgg
tcagttcccgactgtgaattaaaacaaactctacaaggccacaaatgcaacgttggggct
atcgttttccatccgaaggcgaccataagtcaagaagatacaatttgcaatatggcttct
tgcgcagtagatggatctgtcaaactatgggatttcacaagccatgaacccattgctgat
atcgaaggtcacatgcctcacagggtatcaaggctgaagttccatccttcgggaaggttt
ctgggaacttgctgttatgataattcgtggcgtttgtgggatctggaacagtgcaccgaa
gtactccatcaagaagggcacgtcaagccagtgtactgcatatcgttccaggctgatggg
tctgtttgtgctacaggggggttggacgcgttcggcagggtttgggacttgcgcaccgga
aggtgcataatgttcatggaaggtcacctgaagagtatcttgggcatcgacttttcatct
aacggattccagatagccactgccagcgaggacaactcatgcaaaatttgggacctccgc
aaaaggtccatcctttacaccattcccgctcacacaaacctcatttccgaagtgaaattc
cagccggaacacggcagctacctggccacagcgtcctacgataacacggtcaagctgtgg
atgaacaggacgtggcagcctttgaaaactctttcaggccacgacgggaagattatgtct
gtggatatttctccggatgatcagtatatagccactagttcgtatgatagaacgttcaag
ctgtggactcctgagttgtcttag
DBGET
integrated database retrieval system
