Leptinotarsa decemlineata (Colorado potato beetle): 111508046
Help
Entry
111508046 CDS
T07512
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1
KO
K12857
Prp8 binding protein
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111508046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111508046
Spliceosome [BR:
ldc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111508046
Complex C
U5 SnRNP specific factors
111508046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR19_1st
WD_LRWD1
KNTC1_N
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
111508046
NCBI-ProteinID:
XP_023019232
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MFNIVIYLRNISYSVQLSADFFLVLWSVYGECENISVMTGHTGAVTELHFTTDGSNIFTS
STDHTLGLWDIVTSQRIKKYKGHTTFVNCVQGARRGPQLLCSGSDDSTLRIWDIRKKQSV
ATLNTVYQTTAVSFNDTAEQIFSGGIDNDIKVWDVRTKEILYSLRGHTDTITGLSLSSDG
SYLLSNSMDNTLRIWDVRAFAPAERCVKIFNGHQHNFEKNLLRCAWSSDGTKVSAGSADR
FVYIWDTTSRRIIYKLPGHNGSVNDIKFHPEEPIILSGASDKQLYLGEID
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatagttatttatttaaggaatatttcatacagtgtacaactatctgctgac
ttttttttagttttatggagtgtttatggtgaatgtgaaaatatatcagttatgacaggc
catacaggagcagtcactgaattacatttcacaacagatggatcaaatatcttcacttct
agtactgatcacacgttaggtttatgggatatagtaacatcacagagaatcaaaaagtac
aaggggcataccacctttgtaaactgtgttcaaggtgctagaagagggccccaattatta
tgttcagggagtgatgacagtaccttgcgaatctgggatattaggaagaaacagagtgtt
gctacactaaatacagtttaccaaacaacagctgtgagttttaatgacacagctgaacag
attttcagtggaggaatcgataatgatatcaaggtgtgggatgtccgaacgaaagaaatc
ctttattcattacggggacacactgatacaattacaggcctttcgttaagttctgatggt
tcttatcttttgagcaattcaatggacaacacactaagaatatgggatgtaagagccttt
gcacctgctgaaaggtgtgtgaaaattttcaatggacatcaacataattttgagaaaaac
ttgttacgatgtgcatggtcttctgatggaaccaaagtttctgcgggttcagcagacaga
ttcgtttatatttgggataccacatctagaaggataatttataaacttcccgggcataat
ggtagtgttaacgatattaaattccatcctgaagagcctataattttgtccggtgcaagt
gataaacaattatatttaggagaaattgattga
DBGET
integrated database retrieval system
