Leptinotarsa decemlineata (Colorado potato beetle): 111508265
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Entry
111508265 CDS
T07512
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111508265
03016 Transfer RNA biogenesis [BR:
ldc03016
]
111508265
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111508265
Spliceosome [BR:
ldc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111508265
Transfer RNA biogenesis [BR:
ldc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111508265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111508265
NCBI-ProteinID:
XP_023019474
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTAFEEFGVLPEIAKALEELDWTLPTDIQAEGIPLVLGGGDVLMAAETGSGKTAAFCLPV
IQIVWETIKDIQSGKAAKAATESMSPPWTMSTLDRGNALAVSPDGLRVQSREQKEWHGVR
CTRGVKSGKWGFEATVTDEGLCRVGWSSLQANLDLGTDRFGYGFGGTGKKSNNKQFDNYG
EPFGKSDVITCLLDGDSGEIKFLKNGVDLGVAFRADKKIIGDGLFPAVVLKNAEMAFNFG
DKPFKHSLPNGYQPVNSAAADKVVSNTNGQGGAGAAATKLINNAPQAIIIEPSRELAEQT
SNQIQKFKKYLEDPKIRELLVIGGVNVKEQISFLQNTGADIIVGTPGRLEDLIQGGYLSL
ANCRFFVLDEADGLLKQGYTDLIERLHREMPKITSDGRRLQMIVCSATLHAFEVKKMAEK
LMYFPTWVDLKGEDAVPETVHHVVVNVDPQQDKSWQNLSKFDXTKTSKIQEFAXTRNESN
QHSFQFFAGEYTIRAIDVHNMDRAIIFCRTKLDCDNLEKYMKQIDRNHYSCVCLHGDRKP
HERKANLESFKKGQVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVGRAER
MGLAISLVSTVPEKVWYHGEWCKTRGRNCWNTNLTDVKGCCIWYNEPQFIADIEEHLNVT
IQQIGPDIVVPHDDFDGKVVYGEKRKGMGSNYENHTAQMAPIVKELTKLESEAQLLYVKR
HLTKLTRSY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttttgaagaatttggggttctcccagaaattgccaaggctctagaagaacta
gattggacactaccaacagatattcaggctgaaggcataccccttgtcctaggaggcgga
gatgttcttatggctgcagaaaccggcagtggaaaaactgctgcgttttgtttaccagtt
atacagatagtatgggagactataaaggacatccagtcgggaaaagctgccaaggcagca
acagagagcatgtctccgccatggacaatgtcgactctagatagagggaatgctctagca
gtctcccccgatggtctgagggttcaatcacgagagcagaaagagtggcatggggttagg
tgcacaagaggtgtcaaatctggcaaatggggcttcgaagctactgttacagacgagggt
ttatgtagagtaggctggtcctccttgcaggcaaatttagaccttgggactgacaggttt
ggatatggttttggaggcacaggaaagaagtcaaacaataagcagttcgacaattatgga
gaaccatttggaaaaagtgatgtgataacatgcctgttggacggagatagtggagaaatc
aaatttttgaaaaatggtgtggatcttggagttgcatttcgtgctgataagaaaatcatt
ggcgacggtttgttccctgcagttgtcttgaaaaatgctgaaatggctttcaattttgga
gacaaacccttcaaacacagcttaccgaatggttaccagcctgtcaattctgcagcagct
gacaaggttgtttcaaacaccaacggacaggggggagctggtgcagcagcaacaaaactg
atcaataatgcacctcaggcgataattatcgagccatccagagaactggctgaacaaacc
agtaaccaaatacagaagttcaagaaatatctagaagaccctaaaattcgtgagctgcta
gtaattggaggagtaaacgtaaaggagcaaatatcatttttacaaaacacaggggccgac
atcattgtaggtacccctggaagattggaagatctgattcaaggaggttatctatcattg
gcaaactgtaggttctttgtgctcgacgaggccgatggattgttgaagcagggttacact
gatctaatcgaaagactgcacagagagatgcccaaaatcacctccgacggacgtaggctg
caaatgattgtttgcagtgctacccttcatgctttcgaagttaaaaaaatggccgaaaag
ctgatgtattttcctacctgggtggatcttaaaggagaggacgcggtacctgaaactgtc
caccatgttgtcgttaacgttgatccccagcaagataagagctggcagaatttaagcaaa
ttcgattagacaaaaacatccaagatacaagaatttgcttgaacccgaaacgaaagcaat
caacactcttttcaattttttgcaggagaatatacgattcgagccattgatgttcacaac
atggaccgagctatcatattctgtcgaaccaaactagattgcgacaatctagaaaaatac
atgaagcagatcgacagaaatcattattcttgcgtgtgccttcatggtgatagaaagccg
catgaaaggaaagctaatttagaatcattcaaaaaagggcaagttaaattcctcatctgt
accgatgtggcagctagaggtctagacataacagggttgcctttcatgatcaatgtaaca
cttcccgatgaaaaatcgaattacgttcatagaatcggtcgtgttggacgggccgaaaga
atgggattggccatcagcttagtcagtactgtaccggaaaaggtctggtaccatggggaa
tggtgcaaaacgagaggaagaaactgttggaacaccaatttgacagatgtcaaaggatgc
tgtatatggtacaatgaacctcaattcatcgccgacattgaggaacatttgaatgtgaca
atccagcaaatagggcccgatatagtggttccacatgacgattttgatggtaaagtcgtt
tacggtgaaaaacgaaaaggtatgggttcaaattatgaaaatcacactgcccagatggct
cctatagtcaaggaattgactaagttagagagtgaagcacaattgctttacgttaaaagg
catttaacgaaattaactagatcgtattaa
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