Leptinotarsa decemlineata (Colorado potato beetle): 111508943
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Entry
111508943 CDS
T07512
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111508943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111508943
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111508943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
111508943
NCBI-ProteinID:
XP_023020362
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MARHRDIRNMVPEDYAYDDEVYGHSVDDDYYISPSHRQFIYNREVSTRSSESDIKEELEV
EVELSDTDKAKLESCIDKIKEMLGALAISRNDLVNIIVQDNFDVEKATNTILENPRFSQT
GTTKTKVFSQSAAIQLSEGEGTNVKVVASTPQTATNVTKGFELPQKKFDSTPRSQSPASG
RATPVYTANSETSDENRNQKVRDSKFDPQEMFKKERGTGKEHLYMVVVGHVDAGKSTLMG
HLLCKLGQVNQRTMHKYEQESKKLGKQSFMYAWVLDETGEERNRGITMDVGRFQFETNNK
AVTLLDAPGHKDFIPNMISGAGQADVALLVIDATCGEFETGFDLGGQTREHALLVRSLGV
TQLAVVINKLDTVSWSQDRFNEIVKKLTTFLRLVGFKESDVTFVPCSGLTGENLITKPTE
IKLSEWYNGPCLMDVIDNFRTLDRPVSKPFRLSVNDIFKGTGTFFCVSGRVETGTLRAGD
RVLICPNKEFATVKSLSIEEVPHSVVFAGDQVTATLSGIDMQNVSVGNILCDPQNPVQVV
SKFQARIVVFNVTVPITKGFSVILHNQSLVEPVIVSKLISQLNKNTGEVLKKHPRFLGNN
TSAIVEIQSSKPIALELYSEYKELGRVMLRVGGVTIAAGLVTKIIL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcacagagatatacgaaatatggttccagaagattatgcatatgatgatgaa
gtatatggccactcagtcgatgatgattattatatatctcctagtcatagacaatttata
tacaatcgagaggtttctacacgaagctcagaaagtgatataaaagaggaattggaggtt
gaagtggagttatcagatactgacaaggctaaactagaatcttgtattgataaaattaag
gaaatgttaggcgctcttgctatttccaggaacgatctggtcaacataattgtccaggac
aatttcgatgttgagaaagcaactaacacaattttggagaacccaagattttcacagact
ggaaccactaaaacaaaagttttctcacaatcagctgcaatccagctatctgaaggggaa
ggcactaacgttaaagtggttgcctcgactcctcaaaccgccactaatgttactaagggt
tttgagttgcctcaaaagaaatttgactcgaccccgagatcccagtcccctgcttctgga
agggcaactccagtctacacggctaactctgaaacatccgacgagaacagaaaccaaaaa
gtcagagacagcaagtttgatcctcaagaaatgtttaaaaaagaacgagggactggcaaa
gaacatttgtacatggtggttgtcggtcatgttgatgctggaaagagtaccctaatggga
catttactttgcaagttgggacaggtcaaccaacgaacgatgcataaatacgaacaggaa
agtaagaaacttggaaaacaaagtttcatgtatgcttgggttcttgacgaaactggagaa
gagcgcaacaggggaatcaccatggatgtggggaggtttcagttcgaaactaacaacaaa
gcggtaactctactggacgctcctggtcataaagacttcatccccaacatgatctcagga
gcaggtcaggctgacgtagctctcttggtaatcgacgcaacttgtggagaattcgaaact
ggttttgacttgggtggacaaactagagaacacgctcttcttgtgagatctctcggggtg
acccaactggccgttgtaatcaacaaactagacactgtgtcgtggtcgcaagatagattc
aatgaaatcgtcaaaaagttgacgacttttcttaggttagttggtttcaaggagtctgat
gtaaccttcgtaccctgcagtggattaaccggggagaacctgatcactaaacctactgaa
atcaaactatcagaatggtacaatgggccttgcctcatggatgtgatagataattttaga
accttagataggccagtatctaaacctttcagattatcggtcaatgatatattcaagggc
acaggtacatttttttgcgtatctggaagagtagaaaccggaactttgagagctggtgac
agagtgttgatttgccccaacaaagagtttgctactgtcaagtctctcagcatagaagaa
gtgccacattctgttgtttttgctggtgatcaagttacagctaccctgtcggggattgac
atgcaaaacgtttctgtaggaaatattttatgtgacccccagaatcctgttcaagtagtt
tccaagtttcaagctagaatagttgtctttaatgttactgttcctattacgaaaggattt
tctgtaattctacacaaccagtcgctggttgaaccagtgattgtgagcaaattgatttcc
cagttgaacaaaaacactggagaagtactgaagaaacatcccaggtttctagggaacaat
accagtgctattgtagaaattcaatcgtcaaaacctattgctctagaattatatagtgaa
tacaaagaacttggaagggttatgttaagggtggggggcgtaacaatagcagcggggctc
gttactaaaattatattgtaa
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