Leptinotarsa decemlineata (Colorado potato beetle): 111509012
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Entry
111509012 CDS
T07512
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111509012
03009 Ribosome biogenesis [BR:
ldc03009
]
111509012
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111509012
Spliceosome [BR:
ldc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111509012
Ribosome biogenesis [BR:
ldc03009
]
Eukaryotic type
Pre-60S particles
Helicases
111509012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
111509012
NCBI-ProteinID:
XP_023020447
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MKNNIKSFDTIIRTIDEDDDIEYFSEESDIEVEFQPTKQKSKNKADFATDFNFVSSVEEY
NKDSWNDLTKYVKRKAKQKTDDKIKKVRQAQIEDDNDEKDEEDEHSDISLSDDEMKHDKI
KVKENKKKKVKASEETETFFDDIEINTEAGSFYQMNLSRPLLKAISEMKFVHPTPIQSAT
IPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPSGNVPVTRVLVLVPTRELGVQVYQ
VTKQISQFSDIQIGLAVGGLDLKTQEGILRKNPDIVIATPGRLIDHLKSTPTFSLESVEV
LILDEADRMLDEYFAEQMNEIIKQCSKKRQTMLFSATMTDEVESLAAVSLTKPVRLFVDS
NRDVAFNLRQEFIRIRSEKEAEREPILAALVCRTFREHCMVFVQTKKQAHRLHILLGLLG
LRVAELHGNLTQPQRLDSLEKFKTKQVDILIATDVAARGLDISGVQTVINFIMPATVEHY
IHRVGRTARAGRAGVSVSLAGEKERKIVKDVIKRAKNPVKSRVIPADILEKYKDKLLRLE
PQITQILQEEYEERMLSKVENQANKAEKLLKGEQDEKRPWFQTKTQRKEEKDRLSLKNVN
EKNKISKDIKKKNKKGGKETPEDRVSNELNKVALLQAKLAKRKQKQKKIATVKDDTLAAV
AASGKKRKSHFADLVDTSQKKAKKLRYDANFKQKMKNKEGKNKSNKKTVKKGKSFGRPQQ
KKRK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaatataaaatcatttgataccatcataagaacaatcgatgaagatgatgac
atcgaatatttttcagaagagagtgatatcgaagttgagttccaacctacgaaacagaaa
agtaaaaataaagcagattttgcaacagacttcaattttgtgagctctgtggaagagtac
aataaagattcttggaatgatctcacaaaatatgtcaagcgcaaagccaaacaaaaaact
gatgacaaaataaaaaaagttcggcaagctcaaattgaagatgataatgatgaaaaagat
gaggaagatgaacactcagatatttcattgtccgacgatgaaatgaaacatgataagatc
aaagtcaaggaaaataagaaaaagaaagtcaaggctagtgaagaaacggaaacatttttt
gatgatattgaaatcaatactgaggctggtagtttctatcagatgaatttatcacgacct
ttattgaaggctatttctgaaatgaagtttgtccatccaactcctattcagtcggcaaca
attccagtagctttgctaggtagagatatttgtgggtgtgctgccacaggtacgggtaag
acagctgcctacatgctaccaaccttggaacgtctcctctataggccatcaggcaatgta
ccagtcactcgagtattagttctggttcccaccagagaattaggtgtccaagtttaccaa
gtcaccaaacaaattagccagttttcagacatccaaatcggtttggcagtaggaggattg
gatctcaaaacacaagaaggcatcctgagaaaaaacccagatattgtcattgccacacct
ggtcgtttaattgaccatttgaagagtacaccaacatttagtttagaatcagtagaagta
cttatactggacgaagctgatcggatgcttgacgaatactttgctgaacaaatgaatgaa
atcatcaagcagtgctcaaagaaaagacaaacaatgttgttctctgcaaccatgactgat
gaagtggaaagtttagcagctgtttctctcactaaaccagttagattgtttgttgacagt
aatagagatgtagcattcaatttgagacaagagttcatcaggatcaggtcagagaaagag
gctgaaagagagccaattcttgctgctttagtttgtcgaacatttcgtgaacactgtatg
gtgtttgtacagactaaaaagcaagcccatcgattgcatatcttgctaggtttactagga
ctacgagtggctgaactacatggtaacctcacccaaccgcagcgtttagacagtttagaa
aaatttaagacaaaacaagttgatattctcatagctacagatgttgcagctcgtggtttg
gatatatcaggagttcagactgttattaattttattatgcctgccactgtggagcattac
attcacagagttggaagaacagcaagagcaggacgtgctggggtttctgtaagtttagca
ggggagaaggaaaggaaaattgtaaaagatgtaattaaacgagcaaaaaatcctgttaaa
agtagggttatacctgcagatatcttagagaagtacaaggacaaattactgcgattagaa
cctcagattacacaaatcctacaagaagaatatgaagagaggatgcttagtaaagtagaa
aaccaagcgaacaaggctgaaaaattactgaaaggagagcaagacgagaagcgaccatgg
tttcagaccaaaacccagcgaaaggaagaaaaagatcggcttagtctcaaaaatgtaaac
gaaaagaataaaatatctaaagacattaagaagaaaaataaaaaaggtggaaaagaaaca
ccagaagatagagtcagtaatgaattgaacaaagttgctttacttcaagcaaaactggct
aagagaaaacagaaacaaaagaagattgccacagtaaaagatgacactttggcagctgtt
gctgcttcaggtaaaaaacggaagtcacattttgcagatttggtcgatacatcacagaaa
aaggcgaaaaaacttcgatatgatgctaatttcaaacagaaaatgaagaataaagaagga
aaaaataagagcaataaaaaaactgtaaaaaaaggaaagagcttcggtaggccccaacag
aaaaaaagaaaatga
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